Microarray Probes on PGSC0003DMT400069191
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_16819_PI426222305 |
JHI_St_60k_v1 |
GCGGTTGTATAAACTATGCGAAGTTGAATAAAATATTTTGGTCAAAAAATGTCCTTGCCG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400069191
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400069191 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G09340.1 |
+1 |
0.0 |
649 |
315/378 (83%) |
chloroplast RNA binding | chr1:3015473-3018035 FORWARD LENGTH=378 |
Transcript Sequence (1584 bp)
>PGSC0003DMT400069191 1584 pgsc_dm_v3.4
GAGGGATTCTAAGTGGGGTCTCTGTCTTATCTCAATTGTAAGAATGAGAGGAAGCCAGAA
CAAATCATAATCACTAGAAGAAGAAGAACAAATGGACAACAAGAAAATCATCATAGCCCT
TCTCCTTCTTCTTTATTCTCTGCCCCAATTTCTTCTTCACACTGAGGAAGGAAAAGGCAA
CAAATCAGCAACAATATGGCTAGTTTGGTTGCTATTCAACCCAAACAGCCTTCTTTCTCT
GTTCTCCCTTCTTCCCATTCTGACTTCAATGGTGCCAGATTGATCTCCTCATTTCAGTAT
AAGAGGAAACCATGCCTGTCAAAAGGAGCATTGCAAGTTACAGCCTCGAGTGAAAAGAAA
ATCCTTATAATGGGAGGCACACGATTCATTGGTGTGTTTCTATCCAGACTTCTTGTGAAA
GAAGGCCACCAGGTTACTCTATTCACAAGAGGAAAAGCTCCAATATCTCAACAATTACCA
GGTGAATCAGACCAGGATTATGCTGATTTCTCCTCTAAGTTATTGCACTTGAAGGGTGAC
AGAATGGATTTCGATTTTGTGAAGAGTAGTCTTTCTGCAGAGGGCTATGATGTTGTATAT
GACATAAATGGACGTGAAGCAACTGAAGTGGAGCCAATATTGGATGCATTACCTAATCTA
GAACAGTACATATACTGCTCTTCAGCTGGTGTATACCTTAAAACTGATTATTTACCACAT
TTTGAGGTTGATGCAGGTGACCCGAAGAGCAGGCATAAAGGAAAGCTTGAGACAGAGAGC
TTGTTAGTATCACGAGATGTTAATTGGACTTCTCTAAGGCCTGTTTATATTTATGGGCCA
CTTAACTACAATCCTGTTGAAGAGTGGTTCTTCCACCGATTGAAAGCTGGTCGCCCAATT
CCAATTCCTAACTCAGGGATGCAAATAACTCAACTTGGACATGTGAAGGATCTTGCAAAG
GCTTTTGTTCAGGTTCTTGGAAATGAGAAAGCAAGCAAGCAAGTATTTAACATATCCGGA
GAGAAATATGTCACATTTGATGGATTAGCTAAGGCTTGCGCCAAGGCTGGTGGTTTCCCT
GAACCCGAGCTTGTTCATTACAACCCTAAAGAGTTCGATTTTGGCAAGAAGAAAGCATTC
CCATTCCGTGACCAGCATTTCTTTACATCAATCGAAAAGTCAAAGGCTCTGCTAGGATGG
AAACCGGATTTTGATCTGGTGGAAGGTCTTACAGACTCTTACAACCTAGATTTCGGACGG
GGAACATTCAGGAAAGCAGCTGATTTCTCTACAGATGATATGATTCTTGAAAAGAAACTA
GTTCCCCAGAGCTAGGATTTCCTGTTTTTCATTTTATAAGTTTTGGTTTCTTACTTTTCC
TCCAAGAAGTTCACAAGTCTTTAGTGGCCAAACTATTTGAAATTTTCCTTGTATATTAAC
TTCACTGAGATGAAATGAATAACAAGTATTGTCATGTTGCCATAAACATTTTGTTGGGGA
GGGGGTATAGTGTCGCGGTTGTATAAACTATGCGAAGTTGAATAAAATATTTTGGTCAAA
AAATGTCCTTGCCGTTAATAGTTT
