Microarray Probes on PGSC0003DMT400069189
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_16622_PI426222305 |
JHI_St_60k_v1 |
GCAGCTGATTTCTCTACAGATGATATGATTCTTGAAAAGAAACTAGTTCCCCAGAGCTAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400069189
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400069189 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G09340.1 |
+1 |
0.0 |
633 |
315/409 (77%) |
chloroplast RNA binding | chr1:3015473-3018035 FORWARD LENGTH=378 |
Transcript Sequence (1233 bp)
>PGSC0003DMT400069189 1233 pgsc_dm_v3.4
ATGGCTAGTTTGGTTGCTATTCAACCCAAACAGCCTTCTTTCTCTGTTCTCCCTTCTTCC
CATTCTGACTTCAATGGTGCCAGATTGATCTCCTCATTTCAGTATAAGAGGAAACCATGC
CTGTCAAAAGGAGCATTGCAAGTTACAGCCTCGAGTGAAAAGAAAATCCTTATAATGGGA
GGCACACGATTCATTGGTGTGTTTCTATCCAGACTTCTTGTGAAAGAAGGCCACCAGGCG
AAGATTTTAACCTTTGGAGTGAAGATTATAACCTTTGATGTTAGAAGTTTCCTTGAAAAT
TCACGATCTTATGATGATTCACAAATGCAGGTTACTCTATTCACAAGAGGAAAAGCTCCA
ATATCTCAACAATTACCAGGTGAATCAGACCAGGATTATGCTGATTTCTCCTCTAAGTTA
TTGCACTTGAAGGGTGACAGAATGGATTTCGATTTTGTGAAGAGTAGTCTTTCTGCAGAG
GGCTATGATGTTGTATATGACATAAATGGACGTGAAGCAACTGAAGTGGAGCCAATATTG
GATGCATTACCTAATCTAGAACAGTACATATACTGCTCTTCAGCTGGTGTATACCTTAAA
ACTGATTATTTACCACATTTTGAGGTTGATGCAGGTGACCCGAAGAGCAGGCATAAAGGA
AAGCTTGAGACAGAGAGCTTGTTAGTATCACGAGATGTTAATTGGACTTCTCTAAGGCCT
GTTTATATTTATGGGCCACTTAACTACAATCCTGTTGAAGAGTGGTTCTTCCACCGATTG
AAAGCTGGTCGCCCAATTCCAATTCCTAACTCAGGGATGCAAATAACTCAACTTGGACAT
GTGAAGGATCTTGCAAAGGCTTTTGTTCAGGTTCTTGGAAATGAGAAAGCAAGCAAGCAA
GTATTTAACATATCCGGAGAGAAATATGTCACATTTGATGGATTAGCTAAGGCTTGCGCC
AAGGCTGGTGGTTTCCCTGAACCCGAGCTTGTTCATTACAACCCTAAAGAGTTCGATTTT
GGCAAGAAGAAAGCATTCCCATTCCGTGACCAGCATTTCTTTACATCAATCGAAAAGTCA
AAGGCTCTGCTAGGATGGAAACCGGATTTTGATCTGGTGGAAGGTCTTACAGACTCTTAC
AACCTAGATTTCGGACGGGGAACATTCAGGAAAGCAGCTGATTTCTCTACAGATGATATG
ATTCTTGAAAAGAAACTAGTTCCCCAGAGCTAG
