Microarray Probes on PGSC0003DMT400068786
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_50581_PI426222305 |
JHI_St_60k_v1 |
TATGCAATGATCTCCCAATACTCAAAGAGCTTTTATCTATCCAGAAACAAGCTTGATGGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400068786
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400068786 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G20480.1 |
+1 |
7e-42 |
158 |
85/219 (39%) |
EF-TU receptor | chr5:6922497-6925679 FORWARD LENGTH=1031 |
Transcript Sequence (1118 bp)
>PGSC0003DMT400068786 1118 pgsc_dm_v3.4
AAAGCAAGAGTATTTACAAAGAATTACGCACACAATAAATAAAGCAAAACTTGGTTTACT
TGCCATGTCTTAATTGGCTGATTAGAGGAATTTTTTTGCCACCATATTTGACCATTCTGA
TTGAGATGTGAAATACTTGATTGAATGGAAAAATCTCCTAAAAAGAGATCTTATTGCTTT
TCAAAGTCTCAAAACCACAGGTTACTAGTACTAATATTTGCACTAATGGAGAAAGCCTTC
ACATTTTTCCTCTTAACAATACTCTTGTTGCCTCACTATGTTATGGCCCAAACCAACATT
ACAACTGATCAATTAGCTCTTCTCTCTTTTAAATCCCAAATTAGTTCCGACCCCTTTCAC
TTCTTGAATGAAAGTTGGTCTCCTGCTATTTCTGTTTGCCGTTGGGTTGGAGTCATTTGT
GGTTCTCGTCACCAGCGAGTGAAGTCGTTGAAGCTTTCCAACTTTGCTCTTACAGGAAGA
ATTCCCCGTGATTTTGGAAATCTCACATTTCTTGTTTCTCTTGACTTGGGAAACAACCAT
TTCCACGGAAATTTGCCTCAAGAAATGGCACATTTGCGTCGGCTTAAGTTTCTTGATTTA
AGTTTAAACAGCTTCAGAGGGGAAATTCCTTCTTGGTTTGGGTTTTTACACCAACTTCAA
GTTGTAAACCTTAGGAGTAACAGTTTTACTGGTTCCATTCCTCCGTCACTCTCGAATGCC
TCAAGGTTGGAGATTTTAGAAATATCTACCAATTTACTTGAAGGAAACATCCCGGAAGAG
ATTGGCAATCTTCACAACCTGAAATCGTTGTCCATAGAACAAAATCAGCTTACGGGTTCT
ATACCATTCACATTATTCAATATTTCTAGAATTGAAGTCATTGCATTTTCATATAATAGC
CTATCAGGAGATCTTCCCAATGGTTTATGCAATGATCTCCCAATACTCAAAGAGCTTTTA
TCTATCCAGAAACAAGCTTGATGGTCATATGCCTACAAGCTTGTCAAATTGTTCACGACT
TCAAATATTGTCTCTATCTGGAAATTAATTTTGATGGACCAATACATAATGAAATTGGAA
AATTGACTAACTTGCAGAAATTGTATCTCGGATACAAC
