Microarray Probes on PGSC0003DMT400068625
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_50659_PI426222305 |
JHI_St_60k_v1 |
GGAAAGTGCTTTAGTTACATGTATATCCTTCTGTTGACTTGATTGTTGCAATCATATGTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400068625
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400068625 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G14960.1 |
+1 |
0.0 |
937 |
455/589 (77%) |
Auxin-responsive GH3 family protein | chr2:6451659-6453670 REVERSE LENGTH=590 |
Transcript Sequence (2060 bp)
>PGSC0003DMT400068625 2060 pgsc_dm_v3.4
AAAAAAAAAAGATATTTTTTGTATTTTCAATTTTCTCTCATAATGACCATGCATACTAGT
GTTTCATCGTCTCCTCTTGGGCCGCCGGCATGTGAGAAGGATGCTAAGGCCCTTCAATTC
ATCGAAGAGATGACTAGAAATGTTGATTCAGTTCAACAGAAAGTTTTGGCTGAAATACTA
AGCCAAAATGCCAACACTGAGTATCTTCAAAGATTCAAACTAGGTGGTGCTATGGATCGG
GATACATTCAAGTCCAAAATGCCAATTGTCACGTATGAGGAAATTCAACATGATATTCAA
CGTATTGCTAATGGAGATCGTTCTCCAATTTTCTCATCTCATCCCATCTCTGAGTTCCTC
ACCAGCTCGGGGACATCTGCTGGTGAGAGAAAGCTGATGCCCACAACTCAAGATGAGTTA
GACCGGAAACAACTATTGTACAGCCTTCTCATGCCCGTGATGAATCTGTATGTCCCTGGT
CTAGACAAAGGGAAGGGCTTGTACTTTCTATTTATAAAAGCAGAAACCAAGACACCCAGT
GGGCTACTAGCAAGACCTGTCTTGACAAGTTACTACAAAAGTGATCACTTCAAGACGAGG
CCATACGATCCTTACAATGTGTATACTAGTCCCAATGAAGCTGTACTCTGTGTCGACTCT
TTCCAGAGCATGTACTCACAAATGCTTTGTGGCCTTCTTATGAGAGAACAAGTCCTCCGG
TTAGGGGCTGTTTTTGCCTCTGGTCTACTTCGAGCTATTCATTTTCTTCAACTCAATTGG
CAGCAACTTGCTAAAGATATCGCATCAGGAATATTGAATCCCCGAGTTTCTGACCCTTCA
ATAAGGGAATGCATCTCCAAAATACTTAAACCAAATCACGAACTCGCAGAGTTCATTATT
AAGGAATGCGAAAAACAGAACTGGGAAGGGATTATCACTAGAATTTGGCCAAATACAAAG
TACTTGGATGTGATTGTCACAGGTGCAATGGCTCAGTACATCCCTACGCTCGATTATTAC
AGTGGTGGTTTACCAAAGGCATGTACCATGTACGCATCGTCCGAGTGTTATTTTGGCCTT
AATTTAAATCCAATGTGCAAGCCATCTGAAGTATGTTACACTATAATGCCCAATATGTGC
TACTATGAGTTTATCCCTCATGACTCAACCAATCCTCGTGACTCACCACCCCGTCTCGTG
GACCTAGCCAACGTAGAAGTGGGGAAAGAATACGAGCTCGTGATCACAACCTACGCTGGA
TTATGTCGTTACAGAGTCGGTGACATACTCCAGGTCACGGGGTTTCACAACTCTGCTCCT
CAGTTTAAATTCATAAGAAGGAAAAATGTGCTATTGAGCATTGATTCGGACAAAACTGAT
GAGGCCGAGTTGCAAAACGCTGTTGATAGCGCTGCTGCAATTTTGCGCCTGTACAATACT
AGCGTGGTCGAGTACACTAGTTATGCCGACACTAAAACCATTCCGGGACATTACGTTATT
TACTATGAATTACTTATTAAGGACCCAACCAATTCGCCAAGCCACGAGGTTTTGAACCAA
TGTTGTTTGGCTATGGAAGAATGTTTGAACTCGGTTTATCGACAGTGCCGAGTTGCAGAT
AACTCAATTGGACCACTTGAAATTAGAGTAGTGGAAAATGGTACATTTGAAGAGCTAATG
GACTATGCAATTTCTAGAGGTGCATCTATAAATCAGTATAAGGCTCCTAGGTGTGTTAAT
TTTACACCTATAGTGGAATTATTGGACTCCAGGGTTATTTCAGTGCATTTTAGTGCAACT
GCTCCTCATTGGACCCCAGAACGACAGCGTTTACAAGTGTAATGATGAAGTCAATTCAAG
TCATGATCAAGCCCACATGAGTGGAATAAAACCTTTTTTTTTTTTGTTCTTTTTGTATCT
TTATGTGTAGTATTGAATATTCAAAGTTGATATTAATTAGTCAAACTGCTCATGGAAAGT
GCTTTAGTTACATGTATATCCTTCTGTTGACTTGATTGTTGCAATCATATGTGTTTTCTT
CCCTTTTTTGCGGCTTTTTT
