Microarray Probes on PGSC0003DMT400067151
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_26925_PI426222305 |
JHI_St_60k_v1 |
TGTCCATTAAGCTATTAAATATAGTAGCTGAGAGGTCCTTTCCAGGTGAAAAGAGAAAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400067151
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400067151 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G17350.1 |
+2 |
3e-46 |
157 |
108/112 (96%) |
unknown protein; Has 119 Blast hits to 93 proteins in 40 species: Archae - 0; Bacteria - 3; Metazoa - 18; Fungi - 12; Plants - 44; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). | chr2:7545703-7546148 REVERSE LENGTH=117 |
Transcript Sequence (1169 bp)
>PGSC0003DMT400067151 1169 pgsc_dm_v3.4
GGCTTATTGGGCTTTAAATTATAGTGTCAGCAGAAACAAGAAGAAACAAAAAGAGAGTAA
ACTAACGGCCTAAAATTGATCTCTTCAACATTCACATATTCTTTTCTTCTTCAATTAGTC
CGAAAAAGCCGAAGCAACTTGTCTACCCTCTTTGAATTCTCCTTTAATGGCAGCAGTAAC
CAGAAATTAGCAGTGTTCTCCGAAAAGGGTCTCTCAGAAATAGAGAAAAAAAGAAACAAT
AAGATTCTTTTTGAAGAAGAAGAGTGGTTATTTGATGTCGCTGAGAATTAAAGCAGTTGT
TGATAAATTCGTACAAGAATTGAAAGAGGCATTAGATGCTGATATACAAGATAGGATAAT
GAAAGAGAGGGAGATGCAGAGTTATATTGAGGAGCGTGAACGTGAGGTTGCTGAGCGTGA
AGCTGCTTGGAAAGCTGAACTTTCTCGTCGTGAGGCGGAAATTGCTCGGCAAGAAGCCAG
GTTAAAGATGGAGAGGGAAAACCTTGAGAAAGAGAAAAGTGTACTAATGGGGACTGCATC
AAATCAAGACAATCAAGATGGAGCTCTTGAAATAACAGTCAGTGGGGAGAAGTATCGTTG
TCTGAGATTTGCAAAAGCAAAGAAGTGAAGGCACTAAAAGTAGGAGCAAATATCAGTATG
TTTGTTTATACACAGCTATTTTGCTGGATGCTCATATAAATTTTTAATCAAGATTGAATT
TATGCAGCCTCTGTTACTTAGGAAAGAAAAGAAAATTAGATCTGTGCCTCTTTGAAGTTC
ATGAAAAATATTACTGCAATATTTCTGTTGTGCCTCTTTTAGGCCTGAGCTATAAATCTG
TTCTACCTTGGAATCTTGGAAAACCCGAGTTTATCCGAGGCTTCTCTTCCTTTGGATGTT
GTCCAGACAATTCTACTGTTTACATCCAACTACATCCTTCATCCAAATATTGTTTAGGTT
ATGAGTCCGAAGTCGATTCCTCCTAGAGCAAGGTAGTTCTTCAACATGTCATTTGCACAT
AAAGGTATTGTTTTCTAATATTTAGGAAACAAACTTGTCCATTTCTAGCTGTTTACTGTT
TGAGGCAACATTGTAACAAAGTCCTTACTTGTCCATTAAGCTATTAAATATAGTAGCTGA
GAGGTCCTTTCCAGGTGAAAAGAGAAAAG
