Microarray Probes on PGSC0003DMT400067082
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_26905_PI426222305 |
JHI_St_60k_v1 |
CCTTGGTGATGTTAAATTGGATGACATAATTAAAGAGATTGACATAGACAATGATGGACG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400067082
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400067082 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G09570.1 |
+3 |
0.0 |
773 |
384/479 (80%) |
calcium-dependent protein kinase 4 | chr4:6049560-6052184 FORWARD LENGTH=501 |
Transcript Sequence (2002 bp)
>PGSC0003DMT400067082 2002 pgsc_dm_v3.4
GGAAAACAAAAAAAAAAACATAAACTGAAAATTTTCCTTAGTTTCTCCAAAATCAAGAAA
GCACACACAAAAAAAAATTGTTGTAAGAAAACATGGCACAAGTTGTAGCAAAAAAGAGAC
CTCCTATATCCTCAAAGCCATCTCCCAATGTTCTCCCTTACCAAACTCCAAGATTAAGGG
AACATTACACTCTTGGTAAGAAATTAGGGCAAGGGCAATTTGGTACAACATATCAATGTA
CTGAAAAGGTAACAGGGCTACAATATGCATGTAAATCAATTCCAAAAAGGAAACTTTTAT
GTAGGGAAGATTATGAGGATGTTTGGAGAGAAATTCAGATAATGCATCATTTGTCTGAAC
ATCCTAATGTTGTCAGAATCAAAGGGACTTATGAAGACAATCTTTTTGTCCATATTGTTA
TGGAATTGTGTAAAGGGGGTGAGCTTTTTGATAGGATTGTTCAAAAGGGACATTATAGTG
AAAGGCAAGCTGCACATTTGATGAAAACAATTGTTAAGGTTGTTGAGGCTTGTCATTCTC
TTGGTGTCATGCATAGAGATCTTAAGCCTGAAAATTTCTTATTTGATAGTTCTGATGAAG
ATGCTACTCTCAAGGCTACAGATTTCGGGTTGTCGATTTTTTATAAGCCTGGGCAATATG
TCTCTGATGTTGTAGGAAGTCCATATTATGTTGCTCCTGAAGTGTTGCATAAATTCTATG
GACCTGAAATAGATGTATGGAGTGCTGGAGTCATCTTATACATCTTGTTATCTGGGGTTC
CTCCTTTTTGGGCTGAGACGGACAATGGTATATTTAAGCAGATTTTGAAAGGGAAGATAG
ACTTTGAATCTGAACCTTGGCCTCACATTTCTGATAGTGCAAAAGACTTGGTTAAAAAGA
TGCTCGATAGGGATCCTAAAGCACGAATAACTGCTCATGAAGTCCTATGTCATCCGTGGC
TTGTGGACGATGCAGCTGCTCCAGACAAACCTTTGGGATCTGCAGTGTTGAATCGTCTTA
AGCAGTTCTATGATATGAACAAACTTAAAAAGATGGCTTTACGAGTCATAGCAGAAAGGC
TTTCGGAGGAAGAAATAGGAGGCCTAAAGCAGTTGTTCAAAATGATTGACACAGATAGCA
GTGGAACAATCACATATGAGGAACTGAAAGATGGCTTGAAAAGAGTAGGGTCTGACCTAG
TGGAGTCCGACATCAAGGCCCTGATGAAAGCGGCTGACTTTGACAACAGTGGCACGATTG
ACTACGGTGAATTCATTGCTGCAACGTTGCATTTGAATAAGATGGAGAGAGAGGAGAATC
TGCTTGCTGCATTCTCCTACTTTGACAAAGATGGAAGTGGTTATATCACAACTGATGAGC
TTCAACAGGCTTGCGTAGAATTTGGCCTTGGTGATGTTAAATTGGATGACATAATTAAAG
AGATTGACATAGACAATGATGGACGTATAGATTATGGCGAATTTGCAACAATGATGAAGA
AGGGAAATACAGGATTTGCAGCTAGAACAATGAGAGGCAATTTGAATTTTAACTTGGCAG
ATGCACTTGGAGCAAGTGACAGTGAGAAAAAACAATAGAAGACCAAGCTGATAGAACACG
TTGGACCAACCGATAACCGGAGGAGGTCAAGGAGGCTTTCAACCGGACGAGAGGGGTCAA
GTAGAGCTGTATTTGCCAAGACAATGTTGGACTATTACCAGCATAGATTGGTGCTCTATT
ATTTTGTCATGGTAGATAGGTTTAGTGCTATAGTAGGCAAAATTACAGTTGTTGCTACTC
TGAACAACATGCCCAGTATCTTTCCACGAGTGGGATCTGGAGAGGATGGGATGTAAACAG
ACGTTACTCCTACCTTTGCTACTTTATCTTATATAATTTGAGGGTTTTTCCTCTAGTTCA
TAAATTCTAAAATACTACAGTTGTTTGTACCTGAGAAGTGTTGTAAAAACCTTCTTTATG
TCTATATTAATTTTTTGTTATT
