Microarray Probes on PGSC0003DMT400067020
Probe ID | Chip | Probe Sequence |
---|
CUST_17718_PI426222305 |
JHI_St_60k_v1 |
TGCCACCCGTCAGAGTCATCATTGGTAGAATATACCTCTTCAAAGAAGAGAAAATTATAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400067020
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400067020 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT2G44840.1 |
+1 |
1e-42 |
145 |
72/107 (67%) |
ethylene-responsive element binding factor 13 | chr2:18495440-18496120 FORWARD LENGTH=226 |
Transcript Sequence (609 bp)
>PGSC0003DMT400067020 609 pgsc_dm_v3.4
ATGTACCAACAAAAAACAACAACCATTTCAGATTCTGATCTTTCCGTCCTTGAAAACATC
AAATTCCATCTTGTTAATGATTCTGATTTTTCTCAAATCCTTTCAATGTTCGATCCGATA
AATATTAGTTATGCAGATATTATTAATAGCCCGAATTCGAGTTATGGTAGCTCTACATCA
GCAGCAGAGATTAGTTGGGGAGATATGATAACTAATATTGATAATCCATGGCAACGTGTC
GATAAATTGGAGCATGAGGAGGAACCAAAAGAGGAGCCTATAGTTGCACGTGGTGTGCAC
GCGCCTGGTGATTGGAACCGGTATAGAGGCGTCAGGCGGCGGCCGTGGGGTAAGTTCGCG
GCGGAGATAAGAGACCCGGATAGAAAAGGTGCTAGGCTTTGGCTAGGGACTTACGAGACA
CCTGAAGATGCAGCATTGGCGTATGACCAAGCCGCTTATAAGATCCGTGGCTCTAAGGCT
CGACTGAATTTCCCTCATTTAATCGGCTCGAACAAATCCGAGCCGATTAGAGTGGCTCCG
CGTAGGCGTTGCCACCCGTCAGAGTCATCATTGGTAGAATATACCTCTTCAAAGAAGAGA
AAATTATAA