Microarray Probes on PGSC0003DMT400066808
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_17765_PI426222305 |
JHI_St_60k_v1 |
CACTTCAGAAGTTGGTTCCAAATTCGAGCAAGACAGATAAAGCATCAATGCTAGACGAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400066808
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400066808 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G00050.1 |
+1 |
3e-73 |
244 |
163/337 (48%) |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr4:17863-19848 FORWARD LENGTH=399 |
Transcript Sequence (1962 bp)
>PGSC0003DMT400066808 1962 pgsc_dm_v3.4
AAAAGTCTCCTCCCTCCTCACCCACATAATATATATGTTGAATATGACTTAAAAGTTATA
GCCAACTGTCAATCACATTTAATTTTCTTATATCTACCCTTATTCCATCTATTATCTTCT
CTCCAACTCCAAAGTTATAATTCAAACTTTTCAACACTTGCTAAAAATAATAATATATTG
TTGTTTCGATTAATTCGTCACCAAAAAAACACCTTCCTTTTATTTAACTTCGATATGAAT
CAGTGTGTACCGAGTTGGGACCTCGATGACTCTACCGTTCCTCGAAAAAATCCTATACAA
ACTCAATCCAATTCATTAGCCGCTGATGTCCCCTCATTGAATTATGAAGTGGCGGAGCTA
ACGTGGGAAAATGGGCAGTTAGCAATGCATGGGTTAGGGCCTCCACGGGCTAATAATAAG
CCCATATCGAGCTACGGTGGCACCCTTGAATCTATAGTGAACCAAGCCACCCGTTGCAAC
GACGTCCCTCCTCATCTCCACGGGAAGTCCACCGTGGACAGGAACAAAAACGGTGGAGAT
GAGGTGGTTCCTTGGTTCAACAACCACAACGCGGTTGCCTACGCTCCTCCGGCAACCGGT
TTAGTCACCATGACTAAGGATGCGTTGGTGCCGTGTTCGAGGAACACCTCGAATTCGGAC
AACCACCGATCCGTGCACGTGCCGGGGATTGACGGCTCCACACACGTGGGGTCGTGTAGT
GGCGCCACAAACAGTAGAGACTGGATGGTGGCGCCACGCATGAGAGTACGGCCCACGAAA
CGTGAGTGGAATAGCCGTACGGATATGATTAGTGTAAGTGGAAGTGAAACGTGCGGAGGA
GATAGCCGCCAATTGACGGTCGACACGTTTGATAGAGAATTTGGTACGACGATGTACACT
TCTACGTCGATGGGGTCGCCGGAAAACACCAGCTCCGACAAGCAGTGCACCAATAGGACG
GGGGACGATCACGATTCCGTTTGCCACAGCAGAGATGAGAGGGAGGCAGGTGATGATGAG
GATGATAATAACAAAAAAGGGTCTAAAAACTCATCATGTTTTACAAAGAGGAAGAGGGCA
GCCGCCATCCACAACCAGTCTGAACGAAAAAGAAGAGACAAGATTAATCAAAGGATGAAG
ACACTTCAGAAGTTGGTTCCAAATTCGAGCAAGACAGATAAAGCATCAATGCTAGACGAA
GTGATAGAATATTTGAAGCAACTTCAAGCTCAAGTGCACATGATGAGTAGGATGAACATG
TCACCAGCCATGATGTTACCATTGGCTATGCAACAACAATTACAAATGTCTATGATGGGT
ATGGGTATGGGTATGGGTATGGGCATGGGAGTTGCCGGAGTTTTTGATATCAATAACCTT
AGCCGCCCCAATATCCCCGGACTTCCTTCCTTTCTCCACCCTTCTGCCGCCACTGCCGCC
TTCATGCAGCCTATGACCTCCTGGGATAACTCCAGCGCCGCCCCTCCTCCTCCTCCTGCT
ATGCCTGATCCTTTAGCTGCCTTACTCGCTTGCCAATCACAGGTAATTAAACAAGGTTAA
TTATTATACGAGACAAATAATTTCATGGTTTTAGTTAATACTAACAAGTCAATTTTATAT
GGATGCAGCCAATTAACATGGATGCGTATAGAAGAATGGCAGCATTGTACCAGCAATTCC
AACAGCCACCAACAGGCTCTGGCCCTAAAAATTGATAGTGTATATACCATATAGTAGTAG
TTACTATCATTTTGTAAAGTTCTCCTGGTTTTCTTTACGGTTGGATTGACTAGGAGACCC
TTTTACTTGTTTCGAATTGTCATTTTTGTCTGTATACTTTTGACTTTGCCAGCTAAACAC
ATAAACTTGTCCCAAATCTGTATTTCAAATTTCATCTAAAAAGTTGAATAGACTGTTGCC
TTCGTAAAGTGGACAAGTATATATGTAAATATTGAGATCTTT
