Microarray Probes on PGSC0003DMT400066736
Probe ID | Chip | Probe Sequence |
---|
CUST_14399_PI426222305 |
JHI_St_60k_v1 |
GTTGTAAATTCTAAGTAACCATGTGTTTGAATCATCCAATGGAACGTCTTTGAATGTACC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400066736
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400066736 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT4G34380.1 |
+2 |
2e-123 |
318 |
159/243 (65%) |
Transducin/WD40 repeat-like superfamily protein | chr4:16438835-16440322 FORWARD LENGTH=495 |
Transcript Sequence (2104 bp)
>PGSC0003DMT400066736 2104 pgsc_dm_v3.4
CATTCTTCCATTACTCTATTCACAAACCTCTACATTTATTACAAACCAAATTCACTCCAA
AAAGATTCAAATCAACAATCATAATTCATACCTACCATCATTCAATTCATCTTTGTTAAA
AAAAATGACGAGAAAAAATAATAGTATGGGAGCGATCTTGCTACAGAAAGAAAGCTTTCG
AAGAACAAAATTCGGTACCCTTTTGTACTCCGATCCAATCAGTGACCATGAAGAAAGCAG
TAACAATTCCGCTCGCAGCAGCAATGCTTCTTCTGCACCCAGTCCACCTAGAACGTCGTC
GTTTAACGGCACAAATACTACTTCTAACAACAATTCCCCTAATTATTTCATGTCTCCATG
GAACCAATCTGCTTCGCCTTATGTAAAATCTCCGTGGATTCACCAACCATTACTCGATTC
CTCCGAAGAATCAGAATCAAGCGATTGCAAAAATGGTCTAATCGGGTCTCTTGTTCGAGA
AGAAGGACATATATATTCATTAGCTGCATCTGGAGATTTGCTATATACCGGATCAGACAG
CAAAAATATTAGAGTTTGGAAGAACTTGAAGGAATATTCCGGGTTCAAATGTCAAAGCGG
ATTAGTAAAAGCCATTGTTGTTTACGGAGATAAAATATTCACCGGTCATCAAGATGGTAA
AATTCGTGTATGGAAATTTTTAGGGAAAAAAAGAAAAGCATATAAACGTGTTGGTAGTTT
ACCTACCGTTAGAGATTATTTAAAGAGTTCAATTAATCCTAAAGCGTATGTTGAAGTAAG
ACGAAATCGGAATGTTCCTTGGATTAAGCATTTTGATGCTGTTTCTTGTATGAGCTTGGA
TAAAGAGAGAGGATTACTTTATTCTGGATCTTGGGATAAAACACTGAAAGTTTGGAGATT
ATCGGATTCCAAATGCCTTGAATCTATTAATGCTCATCAAGACGCCATTAATTCAGTCGT
TGTTGGATTCGACGGGTTGGTTTTCACTGGATCAGCAGATGGAACGGTTAAAGCTTGGAG
AAGGGAATTAGTTGGGAATAGTGCAAAGCATGTTCTTGTGGAAACACTGTTGAAACAGGA
CAGTGCTGTGACATCACTGGCCGTAAACGCTGCAGCAGCAACGGTAAGAGCACACTTTTA
TTTACTTAATTATTTCATTACGTTATTTAACTCATTCATTTTAAAAAGTTTATGTTGTTA
GACAGAACACACGTCTAATTATTTTACGTGTCAAACAGGTGTATGCCGGATCCTCCGATG
GACTAGTGAATTTCTGGGAGAGACAAAAGCATTTTTTGGAATACGGAGGTGCGCTGAGAG
GTCATAAATTAGCTGTGCTGTGCGTGGCGGTTGCTGGTAATCTTGTATTGAGTGGATCGG
CTGATAAATCCATATGCGTGTGGAGAAGGGAAGAAGGTAGTATCCATAGTTGCTTAACGG
TGTTAACAGGACATAACGGCCCCGTTAAGTGCTTGACTGTCGAACACGATTCAAATGGTA
GCGACAGCGACAGTGAAGATGAAGCTCCCATGGAAAAGAAAAGTGACAAATATTGGAGAG
TGTATAGCGGGAGTTTGGACAATTCCGTGAAGGTTTGGAGACTATCGGAGAACAGCTTTA
GTGGCTTCGAGGAAACATAAAAGAAAAATGATGCAACTTGAAAGGGGAATTCTGAATTCA
GAGTTAAAAAATTGATTAGAAGTGGTGGGAACGCGCTGCCGAGTAGGAGGCTGTGAATTG
CCGTGTGTGGTTGAGTTACTGGTGGCCTGTGACACATAAAAACAGTTTTCCCTTTCACAC
GAAGAGAAAACTGTGCCGTTAAAAAAACCGGTCAGAGGACGGTTCTGTAGGTGGGGGACC
AATGAGCAGAATCTTCATTACTAAGGAACGTTAATATGGGAACTAACATTATTCAAAATG
CATTCATTAATGTTTTCTTTATCTCCTTTCCCACATTTTGGTTGATGATTGTCTTGTATA
AGTTGTAAATTCTAAGTAACCATGTGTTTGAATCATCCAATGGAACGTCTTTGAATGTAC
CTTTTTTTTTTTAAATTTATTAATGAATAAGTTTTTACTTCTTGCATATGTGTTCAATAT
TCGA