Microarray Probes on PGSC0003DMT400066602
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_14451_PI426222305 |
JHI_St_60k_v1 |
TTAAAATCCATTAACGCGAAGGACAGTAGCCAGAATTGGATATAACTTGTACTTGGGGAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400066602
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400066602 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G34030.1 |
+3 |
0.0 |
748 |
372/473 (79%) |
3-methylcrotonyl-CoA carboxylase | chr4:16301298-16303949 FORWARD LENGTH=587 |
Transcript Sequence (2266 bp)
>PGSC0003DMT400066602 2266 pgsc_dm_v3.4
AAAAAAACTTCAAATCTAAAGTTCCAAACTAAAAGGAAAGAAAAAAAAAAGGCAATCAAA
GAGAATGCTGCGAATTTGGACAACGAGGAGATTAGCTTCACAATGCTTGATTCCATGGCG
GATGTACCCAACTACTCTCATTTCGACCCGAAATAGCTCCATCGGAATCCTACACGACAC
TCTCGACCGGAACTCCGATTCGTATACACGAAACTCAAAAGTCATGGATGAACTTGTTTC
ACAGCTTCATTCTCACATTCTCAAGGTTATGGAAGGCGGAGGACCAGAAGCTGTGAAGAG
GCATCGGAGTAGGAATAAGCTTCTTCCTAGAGAGAGGATCGATCGCCTTATTGACCCTGG
CTCTTCATTCCTTGAGCTTTGTCAGAATCCAGCTTGCGGGTCATGAATTGTACCAAGAGT
CATTACCTTCTGGTGGGATAGTTATTGGAATTGGAACAATACATAAGAGACTCTGTATGT
TGGTGGCAAATGATCCTACAGTCAAAGGTGGAAGTTACTTTCCAATAACTGTCAAGAAAC
ATCTCAGGGCACAAGAGATTGCTGCTCAATGCAAACTACCATGTATATATCTTGTTGATA
GTGGTGGTGCTTTCCTTCCAAAGCAAGCCGAGGTTTTTCCTGACAAAGAAAATTTTGGGA
GAATATTTTACAATCAAGCTGTGATGTCCTCTGAAGGTATTCCTCAAATCGCACTGGTGT
TAGGTTCTTGTACTGCTGGAGGAGCTTACATTCCTGCAATGGCTGATGAGAGTGTCATGG
TCAAAGGGAATGGTACTATATTTTTGGCTGGACCTCCTCTTGTAAAGGCAGCAACTGGTG
AGGAAGTTTCTGCAGAAGACCTTGGAGGTGCAACTGTGCATTGTAAGACATCAGGGGTTT
CTGACTACTTTGCCCATGATGAACTGCATGCCCTTGCTATAGGAAGGGATATTGTTAAGA
ACCTGCACATGGCTGGTGGTCCAGAAGTATCTGGACAAACTAGAGCTGATTATAAAGAAC
CTCTGTATGACGTGAAAGAACTTCGCACCATTGCACCAACAGACCTCAAACAGCCCTTTG
ATGTTCGAACAATTATTGCTCGCATTCTCGATGGAAGTGAATTTGATGAATTCAAGAAAC
TGTATGGCACTACACTTGTGACTGGATTTGGAAGAATTTGTGGACAGCCAGTAGGGATCC
TTGGAAATAATGGGATACTGTTTATGGAATCTGCTCAGAAAGGGGCACACTTTATTGAAT
TGTGTACTCAACGTAACATTCCTCTGATCTTCCTTCAGAATATTACTGGATTTATGGTTG
GGTCCAAATCTGAGGCAAGTGGTATTGCCAAAGCTGGAGCTAAAATGGTAATGGCAGTCT
CTTGTGCGAAGGTTCCCAAGATCACAGTAGTTATCGGTGGAAGCTTTGGAGCTGGCAATT
ATGCAATGTGTGGACGTGCATATAGTCCAAATTTCATGTTCTTCTGGCCAAATGCTCGAA
TATCTGTAATGGGAGGCCCTCAGGCTTCTGGAGTCCTTGCTCAAGTAGAGAGAGCCACCA
AGAAAAAGAGGGGAATTCAGTGGACAAAAGAAGAGGAAGAAAAGTTCAAGGCTGAAGTTG
TAGAGGCGTATGACCGAGAGGGCAGCCCATATTATGCCACATCTAGGCTTTGGGATGATG
GCATAATTGATCCAGCAGACACGAGGAGAATATTGAGCCTTTGCATCTCTGCTACCTTGA
ATCGTGGACCAGAAGCTACAAAATATGGTGTGTTCAGAATGTAACATTGCAATCTCAAGC
TTAAGAAATATGTTGCTGCCTGAGCCATAAGGGTTGTTGATTTAGTCAACAGCAGAAACT
CCAACTGCATAATCAGCTAGGTTACAATAAGTTCTAAGTTGTCAAAGCAAAGGTAAATTG
ATTCCATGCCAAGGACGAGAAACTCATGATTTACAAAAAGAAATAGTTGGATTTGGTTGA
GCGCGCAGTCATAGTCCGATGAAGTTATGTTTCTTTATTATTGTAATTGGTTCTGGGAGC
TAATAACTGTGGTTCCGTGGCTGCTTCTAAATTGCTGACTGCATTAAAATGAGAAAAGAA
ACACTTGATACTAAAGTGCCTACAAAACATGGAGAGAAAAGAAGCTTAATCCCTTCAATA
TTCACGCCTTAGTGATCATAAACGAATTTAATTTCCAAGTATAATATTAAAATCCATTAA
CGCGAAGGACAGTAGCCAGAATTGGATATAACTTGTACTTGGGGAA
