Microarray Probes on PGSC0003DMT400066571
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_14434_PI426222305 |
JHI_St_60k_v1 |
CACAACATCATCATCTTCTTCTGTTTGAGCCAAAAATAAAAACACGAAGCCAATGTCTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400066571
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400066571 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G67210.1 |
+3 |
5e-106 |
322 |
170/304 (56%) |
Protein of unknown function (DUF579) | chr5:26819019-26819972 FORWARD LENGTH=317 |
Transcript Sequence (1427 bp)
>PGSC0003DMT400066571 1427 pgsc_dm_v3.4
CGCCAAACAACAACCAAATCCCTCAGAACTTCATTATCACCTCCTCCCATTAACTCCAAT
TTTTTAATTTTATATAGCTTCCCAACACCCTCTCTCTCAAATCATTCTCGTATTATATTA
TTATTTTCGTCCAACAATAGTTATAAGCTTTCAGATTTTTAAATACAAAAAGATATAAAG
GGAGGAAAAAAAAAAAAAGTAGAGAAATCTCACGTACAGAAATCTAGGTAATCGTGTCGT
GCTGCTTTTTTCTCCCTAATCCCTCCGGAATATCTCTGTATACTTTCATGTGAAGAAATC
AGCGAAAGAAAAATCAGAAAAAAACAGGGAGAGAGAGAATGAAGGCTAGTAATGCTAAGC
TTATAGTTTTTCACCCATCTCTTCACAAGCAAGGATCAGGAACAATTACTGCTTCACCTC
GTATTTGGTTTCTTGTTTTCCTTTCCTTTTTCACTTTTGCTTTTGCACTTACTTTCTTCA
CTGCTAAGGATGCGATACCCATCGCGAAAACCGGCACGGATACCGCCGCCGGTAGCTCTC
CGTTGCCGGCGACTGTATTTAACGCGCTTCTTCATTATGCTTCTTTGAACTCGTCTACTG
TTTCTTCCCGCATGTCGGCGGTGGAGCTGAAGACGATCGCTAATGTGCTCCGCCGTTGTA
AAGCTCCTTGTAATTTCCTTGTTTTTGGTCTTACTCACGAAACCCTTTTGTGGCATTCGC
TCAATCACAAAGGGCGTACGGTTTTTGTTGACGAAAGTGCTTATTTGGTATCTAAGTTAG
AAGAGAAGCACCCGGAAATTGAAGCTTACGATGTTCAATTCACGACTAAAGTTAGTGAAT
TGCACGATTTGTTGGATTACACGAAAGAGCAGCTCAGAGGGGAGTGCCGGCCTGTGCAGA
ATCTTCTATTTTCCGACTGTAAATTGGGGATAAATGACCTACCAAATCACATATACGATG
TGCCGTGGGATGTCATTTTGATTGACGGGCCACGTGGGTTTTCCTCTGCCGCTCCGGGAC
GGATGACGGCTATATTTACCGCCGGCGTTTTTGCCCGGAGCAAGAGAGGTAATTCCGACA
AAACCCATGTTTTCGTTCACGAAATCGACAGAAATGTAGAGAAAATCTGCAGTGAAGAGT
TCTTGTGCAGTGAGAATTTGGTGGAAACGAAAGAATTGTTGGGGCATTTCGTGGTGGAAA
AGATGGAAGCTAATAGGTTTGAGTTTTGCTCAGTCTTTGATCCTTCTTCATCTCCCACAA
CATCATCATCTTCTTCTGTTTGAGCCAAAAATAAAAACACGAAGCCAATGTCTTTTTCTT
TTTTATCAAGTTTATAGATATGAGTAATCTGTAATATTTCATAGGTTTTTCAAGTGTGAA
ATATTTAGAAGCTAAAGCAATGATGAACTCAAATATTGCTTTTCAAA
