Microarray Probes on PGSC0003DMT400066542
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_14680_PI426222305 |
JHI_St_60k_v1 |
GGAATGGTGTGATGAGGTAGATTTGCCTTTGATTCCTGGGAAAATATTTTAGGAATTAAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400066542
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400066542 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G15020.1 |
+2 |
0.0 |
585 |
292/547 (53%) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64190.1); Has 72 Blast hits to 72 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:6491706-6493286 REVERSE LENGTH=526 |
Transcript Sequence (1850 bp)
>PGSC0003DMT400066542 1850 pgsc_dm_v3.4
AATTCTCACTTAGCTCCCACACAAGTATAACCTTAAAACTTTCAAAAGCAAAATTAAGAC
ACAACAAAATCAAACACAAATCATGGATGTTTGGTCTTGGATATGTGAACTTCTTGACTC
AGAAAAATGGAGTATCGAGAATGATGATTCCTTTCTCATTTATAATCTTGCTACTTCCAT
AACCAATTCCAGTCAGTCAATTCAATTCAAAGCTGAGAAAAAACTTGACCCTAATAACAC
AGAGACAAATTCTTCATTGGTTTTCTCTATATGTTTGTTGGGGTTTCATGACACCTCTCA
AGAAGAGGTGACCATCTGGGTTTCTGACACGTGTCCTCTTTCATCGGACAAGCCATTCTT
GCCACTTGTTCTACAACTTCTTCAAGAAATCATTTCACGTTCACCCACGGCGCATGATAG
CGCATGCCCACGTTCCCACCTCCAGAAGCTCCAACCCGACCCGGTTTCATGGATCCTCGA
TTCCCACTCACCGGAATCATTCTCAAGCTTCTTCAATCTCATCTTCCTCACGCGACTTTT
CTGGATGTTTGCATTCGACGCACCGGCGGCGGTGGGGTCTCTTTATTTCCACTCGCTGCT
AGCTCCTAACCTTGAAGCCTTCTCGTGCAAGCACGCGCCTGTCCTGCGAACCTTCTTTAT
AACAGTAGGGACTGACGTGGAACTTTGTTTCATGCGCACGTTTGGGTACATGTTAGCAAA
ATGGTTGATTTTAAGAGAAGTTGGCGGCGTAGGATTAAAGTCGTTAACGCCGTTAGCATC
TCATTACTTAGGATTTTCATACGCCACGGAGGCTCACGGGTTATGGATGTTAAAAGGATA
CGCGCCTGTAAAGGCAATGAAACCCACGCGCATGAATTTTGACAAATTTCAATTTCCTGT
TATTGAAGCGAAAGAAATTGCACTAAAATATACACTGGCCCATCAACAGCTTGAGGCTGT
GATACAGTTTGAATATACAGTTGGATTCTATGATGGGTTTATCCAAGTTAGGGCCCGTTT
GGATAACATACGTCTTGGTGTGGCAAGATTGGGGTTTAACAAAAATGATGATGAAGAAGA
TTCTTATTTGCAAGAGAAGCATTTTCCATCTAGGATTCGAGTTTGGGTTGGGCCAGAAAT
TGGTGCTAATTATGTTGGCGGGTTAAGTTTGGGCCGGTCCACTAACAACGTCGAACGCGA
ATTCGAAATGCAAAGAGTCTTAAAGGGCAATTTCGGAAACTCAAAACAACCAGAAGTGAA
GACAAGGGCAAAGATGGCAACAAAATCAAAGATGAAAAATTGGAGGTGGGACCAAGAAGC
GGAAGGGAATGCAGCTGTATACGAAGCGATATTATATGACCACGTGTCAGGGTGTGAGAT
CGCCACGTGGAAGCCGGTTAACGGGGATGATAAGAATAATCAACTTATGAACAATTTTAG
AGGAAGATATTTTGGAGGGAATAGGGCATTTAGTAAGAAGGGTGGTTTGGTATTTGCTGG
GGAGGAATGTGGTGAAGAAGTAGGATGGAGATTGAGCAAAGAAATGGAAGGAAGTGTGTT
GAAATGGAGAGTAGGGGGTCAAGTATGGCTAAGTTATTGGCCAAATAATGTAAAAAGTTC
ATATTACGAGACTAGGCTTGTGGAATGGTGTGATGAGGTAGATTTGCCTTTGATTCCTGG
GAAAATATTTTAGGAATTAATAGTAATATATAAGTGACTTATAAGTACCTACTTCATGTA
ATACTAATATATTGTGTAAGCTTGTGTATGTTATGTATGTATATTTATGGGAATAGTAAT
ATATATAAGTGACTTATAACTACCTATTTCATCTAATACTAATATGTTGT
