Microarray Probes on PGSC0003DMT400066470
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_14687_PI426222305 |
JHI_St_60k_v1 |
GCCATCACAACCAGGTAAAAGCCCAATCTTTTTAGTTCTTTCTTTTCCAAGATTTTGTAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400066470
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400066470 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G26500.2 |
+3 |
4e-20 |
89 |
63/105 (60%) |
cytochrome b6f complex subunit (petM), putative | chr2:11270370-11270747 FORWARD LENGTH=125 |
Transcript Sequence (2542 bp)
>PGSC0003DMT400066470 2542 pgsc_dm_v3.4
ATAATAATGTAGGGGTAAGACTTGAACGTTATGAGGACATTATTGTACTCTTTTATTTTC
CTTTTCATATATGCCTTAAAGCTCAACTATAGCTCTAAAGATTTGTGTTAAAGACAAGTG
CAACTGATAGTGTGATGATGGGAAAAAACTTTGTGAAGATAGGTAAGGCACCACGTTCAA
AACATAGACACGCAGAAGAAACTGAGGAGGAGGAATATGAAGACGAGGAGGAGGAGGAAG
AACAGAATGAGTGGGCTGGCATAGTTGAGAAAAATGCGTCATGTTCAAAGGCTGGATACC
AAAGAGCCACTGCTCGCAAGGTGAGGGACAGCCATGACCAATTTGGGGCAGATATATTCA
AAAGTGGACATGCAACGCGGCCAAGAAATCCTTACTTTATAGCGAAATTACAAGCAAAAA
GGAGAGACCAACTATACGTTCCAATTGATGTGATTAAAGGCTTCAATTTTGAACTCCCTT
CAAGCATAACCATTCGCGACTCTACTGGCAGAGAATTTGAGACAAAACTCAAGAATTGGA
AGGATGGTAGAATATGGCTAATTGGAGGATGGCATAGTTTATGCAGGTGGAACCTTGTGG
AGAAAGATGTCAAGTGTATTTGCGAATTTGTGAAAGGAAAAGGAAATAAAGTCCTTTACT
TGCAAGTTCAAATTCTTCATGAAGGATCAGTTTCCAACTCCAACACAAAACACATGGAAG
AGGAAGACGAAGAAGAAGAAGAAGAAGATTATGATGATGATGATGATGAAGAGGAGGAAG
AAACTGAAGAGGACGAAGAAACAGAGGAGGATGAAAGGACTGGTACATTTAAGAAAAATG
TGTCACATTCAAAAGTTGGAGGCAAAAGAGACACTGCTTGCAAGGTGAGGGATGTCCCTG
ACCAATATGGTGCAGATATATTCAAAAGTGGGCGCGCAACTCAGCCAAAAAATCTGTACT
TTGTAGCGAAAATACGAGTAAAAAGGAGAGATCAACTGTACATTCCGATTGATGTGGTGA
GAGATTACAAACTTGAACTCCCTTCAAGAATGATCATTCGCGATTCCGCTGGCAGAGAAT
TTGAAACGAAACTCAAGAATTGGAAGGACGGTAGAATATGGCTAGCTGGCGGATGGCGCA
GTTTATGTAGGTGGAACCTTGTGGAAAAAGATGACAGATGCATTTGTGAATTTATGAGAG
GAAAAGGCAAACGCGGCCTTTACTTGCAAGTTCATGTTCTCCATGAAGGATCAGTTTCGG
AATAGTGAACTCGTAACAAGTAGTGTTGTTTGTTGACAAATATTGAAGACTTATCTAGTT
TGTATTGATAGCTCTGACAATTAAATGCCTGTTGATTGGTGTTAAGACTAAAATCTGGTT
TATTTACATTTGAATGTTCATCCATGATTTTCTTCTGTTTTAAATGCTTACATATCATTT
GTGCAATTTTGGAAATATCTCCATAACAACTTTGAGAAAATAAAGGAGAAAGAAGTCAAT
TATGCTGCTTCTTTAGGCTAAATTTGGACAAAGGTACCATGGCCCACCCACTTTCCTGGC
TAGTTTTACAAGTTGATGAGCTATAAGATGCCTCATCCAATTTTCTTTGTGAGCCAACCA
TCTCAACACTCCCCTTATCCATTGCTCTCATATTCACCTCACAAAAAATAATATCCCATG
TTCACCCTTTTATTATCTCTCTACTTTGGCAAACTTAAAGCACTCCACAAGCCATCACAA
CCAGGTAAAAGCCCAATCTTTTTAGTTCTTTCTTTTCCAAGATTTTGTATAAACTTGTTA
CAACTTCAAATTTTTTTGTATAGGTTGGTGGTCAGAAAACAATGGCAACAATGACAACAT
TCTCTGCAGCAACAGTAAGTTCAGCAGCCATTATAGGCACAGGCAGAAACTCTTCCCAGA
AAGGAACCAAAGTGAAGTACATTAGTGGATTGAATTCATTTGAAGGGCTTAAGGCAAATA
ACCATGTTGCCTCGTTAGGCCTCCCTATGTCCACTGAACAAGCTTTTGCAAAGATTGTTA
GCTCATTGAAAACCCCATCATCACAAGCCAATGGTGGAGCTTTGTCCTCTACTTGCAATG
CTGCTCTTGAGATTTTCAGGATTGCTACCATTATTCCTGGCTTGGTTCTTGTTGGAGTTG
CTGTTGGATTCGTCCTCCTCCGAATCGAAGCTACTGTAGAGGAATCTGAATGAAACTTTG
GTCTGTTAAACATTTTCTTTTTTCCTGCATCAAGATTCACTCTCTTTCTAATTCCTATAA
TCCTCTGTACTGAGGCAGAATTGATTTGTTTTGGATATATATGTTAAACTTATAAACTAT
GAGTTACTTTAACCCTCTTATTGTATACTCTTCTTTCTAAATGTTATGTGTTGCCTGACA
AGATTTGTACCTGTAGGGCTTTGGACCATATAAGCAATACCATCTATCTAGCTTACTCAT
TCATTATAAGAATGTAATTGAATTCCCTGTTATGTGATGAAACTCTAGTCTTACTTCAAG
ATTAAGGAAAATTGGAAAAAAT
