Microarray Probes on PGSC0003DMT400065996
Probe ID | Chip | Probe Sequence |
---|
CUST_14842_PI426222305 |
JHI_St_60k_v1 |
CCAACGCAATTTTACTTAAGTGGATATTACATGATTGGAGCGACGGAGATTGTATAAAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400065996
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400065996 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT4G35160.1 |
+1 |
7e-63 |
212 |
137/382 (36%) |
O-methyltransferase family protein | chr4:16730989-16732808 REVERSE LENGTH=382 |
Transcript Sequence (1490 bp)
>PGSC0003DMT400065996 1490 pgsc_dm_v3.4
GCCAACCAGTAAAGATAAGTTCATGTTGGTAGGCTGTACGATGAAGGATGGATTGGTCCT
CTCGTTCTTCTTATAGGAGTAAATAATAAATATGTACATATAAATCCTTAGCATCTCAAA
GAAATTATAAGTATCACAAAAATGGCATTGCCTAATAATGATATTGGAGACGAAACTAGA
CAAGTTCTGGCTGCTCAGGCACACATATGGAACCATATATTCAACTACATCAACTCCATG
TCACTAAAATGTGCAATTCAACTTGAAATTCCAGATATCATCCATAGCCATGGCCGACCC
ATGAACCTCTCCGATTTAGCAGAGGCCCTCCCCATCAACAATAATCATGATAAGGCTAAA
ACTCATGATTGTGTTTACCGTCTCATGCGTATTCTAGTTCATGCTGGCTTCTTTATTCAA
GAAGCTGAAGAGGGCTATTTACTTACTCCGACCTCACGTCTCCTCCTCAAAGATGAGCCT
ATGAGCATGATCCCTTTTTTGAATTTCCAACTAGATCCAAATTTGATGGATCCATGGCAT
TCACTCAGCAAATGGTTCAACAACGTCAGTGACGACTCTAATACTACTCCATATGCAACC
GCTCATGGCATGCCATTTTTCAAATATGCAGAGAATGAACCAAGACTTAACCATTTATTT
AACGAAGCCATGGCTAGTGATACCCGTTTGGTCATGACCGTGTTGATTCAAAATGGTAAG
GGATTAATTTTTGAAGGGTTGAAATCGTTGGTGGACGTTGGAGGGGGCACTGGAACCATA
GCTAAAGCTATTGCGGATACATTTCCACAAATAAATTGCACTGTCTTTGAACTCCCTCAT
GTAATTGAAGGGCTAAAAGGAAGCAAGAACCTAAGCTTTGTGGGAGGAGACATGTTTAAC
TCCATTCCTTCTGCCAACGCAATTTTACTTAAGTGGATATTACATGATTGGAGCGACGGA
GATTGTATAAAAATATTGAAGAAATGTAAAGAAGCAATTCCAAGTAAGGAGAATGGAGGA
AAGGTAATCCTAATTGAAATAGTGATGGATCAAAACAAAGACGACGATAAGTCATATGAA
ACTCAACTCTTAATTGATATACTGATGATGATTCTACTAAGTGGAAAAGAAAGAAGCCAA
CAAGAATGGGCAAAACTCTTTTTTGATGCTGGTTATAGTGACTACAAGATTATTCCTATC
TTAGGATTAAGGTGTGTTATTGAGGTTTACCCTTAATCTACACTCTTAATTCGACAAATT
AATAAAACATTCCCCTTCAGTGAATGATCATGATGCATATTTTATTTGTCATTTAATTTC
CATGTGTTAATAAAGGGCCCTTTTGTGTTATGTTTACGATCCTTACTCCTCACGTGATTA
CAACTAGGGCTGTGCATTCGGTTTTTCGATTTGGTTTTGTACTATTTGGTTTGTGCATTA
TTTTGGAAATCTTATTCTTCATCTCCCTATGTGTTAACAAAGGAACCGGC