Microarray Probes on PGSC0003DMT400065939
Probe ID | Chip | Probe Sequence |
---|
CUST_7441_PI426222305 |
JHI_St_60k_v1 |
GAGGTGGGAGAGATATATCTTAGAGGAATAAGTATGTATCTAAGAGGGGATTTTTGTAAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400065939
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400065939 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G79600.1 |
+2 |
0.0 |
999 |
514/649 (79%) |
Protein kinase superfamily protein | chr1:29950105-29952516 REVERSE LENGTH=711 |
Transcript Sequence (2841 bp)
>PGSC0003DMT400065939 2841 pgsc_dm_v3.4
GTACAAAGGGCAGCCACGTAACAGGGAATGGTGGAAAAATAATATGGGCCAGATAATAAT
GGAATTATTGAGAAATTATGCAATATTGGCAAGGTGATTCATTCGTTGTTGCTCCACCTG
TACTTCCTACCCTTTCCATACAATTAGTTTCTCCACCGGCAGCGTCTGTCAGACTGTCAC
GATGAGTTCTTCCGTGGCATCGTTCACGGCCAATCATCATATTATGCTGCTTTCCTGCGC
CGATGCGGTTCGGCTTTCAGGAGCGAATAGCTCCGGCGGACGGAGAGTTAAGTTAAGACT
AACTCCTCCTCGAGCAGCTCTGGTGGAGGCGAGGCCTCAGCAAGTACCAGCAATTAGAGA
TGTAGCCGGGAACAGTAATGTTACTAGGCAAACCCTTCAAGTTGGTCCATCTAGCAGAGA
TCGAGCCGACGATATGCAATCTGAAGCCAGAGCTATGACACGTGCTGCAGATGCTTCTGT
TTATAGCCCTGATTTGTTATCCAACAAGTATGGCTCTCGCCCAATTAAGGTACTGAGAAG
AGCTCTTCAAATATTCAATGGACTTGGTTCATTCGCCCTAAAAGTATGGCTTGACCAGTT
GAACGGGGAGCTTGATCGGAAAATGAGATTGCGTGCCATTGAACTTAGGCAGACTTTCAC
CAGATTGGGGCCTACATTTGTTAAAATTGGTCAGGGTTTATCCACTAGGCCTGATTTATG
CCCACCCGAGTACCTTGAGGAGCTCTCGGAGCTGCAGGATGCTTTGCCAACATTTCCAGA
TGCACAAGCATTTTCATGCATTGAGAGAGAGTTGGGTCGTCCTCTTGAAACTGTCTACTC
ATCTATATCTCCATCACCTATTGCTGCAGCCAGTCTTGGTCAAGTTTATAAAGCTCAACT
TAAGTACTCGGGCCAGGTCGTTGCTGTGAAGGTGCAACGGCCAGGTATTGAAGAAGCAAT
AGGATTAGACTTCTACCTAATAAGGGGAGTAGGCATCCTGATTAATAAATATGTTGACAT
AATTTCAAGTGACATTGTTGCTCTTATTGATGAATTTGCTCGCAGAGTTTATCAAGAGCT
CAACTATGTGCAGGAAGGGCAGAATGCAAGGAGATTTAAAAAGTTGTACGCTGACAAAGA
AGATGTTCTTGTTCCCGATATTTTTTGGGACTACACAAGTGGGAAGGTATTAACAATGGA
GTGGGTTGAAGGTGTCAAGTTGAACGAGCAAGAAGCTATTGAGAGGCAAGGGCTAAAGGT
TTTGGATCTGGTAAATACGGGCATCCAATGCAGTCTCAGACAGCTGCTCGAGTATGGTTA
TTTTCATGCTGATCCTCATCCTGGGAACCTTTTGGCAACACCTGAGGGGAAGCTTGCTTT
TCTTGATTTTGGGATGATGAGTGAAACTCCTGAAGAAGCAAGATTTGCTATTATTGGTCA
TGTTGTTCACATGGTCAATCGGGATTATGAAGCGATGGCTCGTGACTACTATGCTTTAGA
CTTTTTGTCTCCCAATGTGGATGTTTCTCCAATTGTACCAGCACTGCGAGACTTCTTCGA
TGATGCACTTAATTCAACAGTAAGCGAGCTTAACTTCAAAACACTTGTAGATGGTCTGGG
TGCTGTGTTATATCAATATCCCTTTAATGTTCCGGCTTATTACGCATTGATTTTGAGATC
TCTCACTGTTTTAGAAGGTTTAGCATTATATGCTGATCCTAAGTTTAAAGTGCTGGCTGC
TTCATATCCATATTTCGCTAAAAGGCTTCTTACAGATCCTAATCCATATCTGAGAGATGC
TCTCATTGAGTTACTTTTCAAGGATGGGAAATTCAGGTGGAGTAGACTTGAAAACTTGCT
TGTCCAGGGAAAGAAAGACAGGGACTTTTCTGCAAAAGATGCGTTGCAACCTGTCCTGAA
GTTGTTGTTGGGTCCAGATGGTAAAGAATTAAGGGATTTGGTTATCAAAGAGGCAATCCG
TGTCAGTGAAGCTATTATTCTGGGTTCAGCTATTGAATCATTTAATTCTGTTCCTGGTCC
CATGAGGACTTTTGTTTTCAATGGAAATGCAAGTGGTCCCTTTACAATAAGTGCTGCTGA
GCAACAGAGCTTAATGGAACTTAGGGCACAGGTAATCAAGATATGGGGACTATTGCAATC
CTCAGAGAATTTTGATCCGAATCTTTTGCAACCAATTTTGCAGGTACTTCAAGAACCAGA
AGCACGCAGTATTGGAGGGCGTGTAGTTGGTGGAATATCTCAACGTCTTGCAGCGCGCTT
ACTGCAACAAGTTCTTCGTGCACCTGAAACAACTGCTGCTGCATAATTGTTTGTCTTGAA
CTTTAATATAATGTAACTGTCCATAAGCATACTTTAGCCTGTCAAAGGAAGGTCATATAG
AATATAACTCACATCAGATACAACAATCAATAATTCAAGGCAATTGGCTTTTAATTTCCT
AAGTTGGGTTATATAAAATTTAAATGTGCTCGAGTTGCTGACCGGCAAGGAAGATGTCTA
GCACTCAGACTAACTTATAGAAAAATCTCATACATTTGGGGCTTAATTACATTCACTCTC
GGAAGTTTCCCAATTACAAAAGTCTTGGGATTTTTCATTGTTCTTGGATACATTCTTTGG
TTGGTTGTCTAATACATTACTTTTTTTTTTACCCTCCCTAGGAGCTCCCACCCCTTTTTG
CTCCCTTGGTGACTCGAACTCGCAATCTTTGGGTTGGAAGTGAGGGGTAGCAACTCCCTC
TTGTCTGAGAGGTGGGAGAGATATATCTTAGAGGAATAAGTATGTATCTAAGAGGGGATT
TTTGTAATTTTTTAAAATGAC