Microarray Probes on PGSC0003DMT400065417
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_50054_PI426222305 |
JHI_St_60k_v1 |
GTATGAACTTCCTAATGACAAGTTTCCTTTTCAACAAAGTTACTTTCGCCGTCAGAATTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400065417
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400065417 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G52450.1 |
+3 |
9e-179 |
517 |
279/443 (63%) |
MATE efflux family protein | chr5:21289042-21291749 REVERSE LENGTH=486 |
Transcript Sequence (1675 bp)
>PGSC0003DMT400065417 1675 pgsc_dm_v3.4
AAAACTTGAATCTTTTTATTTATGTGAAGGCAAAATTTGAGGAGGGAAAAATGGATATTC
AAGATATTGAGTGTCCACTAATATCAAAATCAAGAAATGAAGAATCCAAGAATAAGAGAA
AATGTGATGATTTTCTTGAAGAAGTTAAGAAGATTTTGGCATTAGCAGGGCCTTTAATGT
CAGTTAATTTTCTTCTATATTGCTTACAGGTGATTTCAGTTATGTTTGTTGGTCATCTTG
GAGAGTTAGCTCTTTCTGGTGCTTCAATGGCTACTTCATTTGCCACTGTCACTGGCTTCA
GCTTGTTGATGGGAATGGGAAGTGCATTGGACACAATTTGTGGGCAAGCATATGGTGCAA
AGCAATATCATATGCTTGGTATCCATATGCAAAGGGCCATGATAGTTCTTCTTTTAGTCA
GCATTCCCTTAGCCTTTATTTGGGCAAATGCAGGACATATTCTTGAAATCTTGGGACAAA
GTCCGGAAATTGCAGCCGAAGCAGGGGATTATGCACGTTTCATGATACCGAGCATCTTTG
CCTATGCACTACTACAATGTCAGATGAGATTTCTACAAGCTCAAAACGACGTCCTCCCTA
TGATGCTTACTGCAGGAGCCACAACTTTGCTGCATTTATTCACTTGTTGGTTTCTCGTGC
TAAAAACCGGCCTTGGCAACAAAGGGGCTGCTCTGGCTAATGCTGCGTCTTACTGGATTA
ACGTGTTCTTGCTAGCTGCATATATTGGGATATCGCCTTCTTGCAAAAGTACTTGGACTG
GATTTTCAGTTGTAGCATTTTCTGATATCCCGAGATACCTTACACTAGCTATTCCTTCAG
CCGTTATGGTTTGCTTGGAGAGTTGGTCATTCGAAATGATGGTTCTGTTATCTGGTCTTC
TTCCTAATCCGAAACTAGAAACCTCAGTTCTTTCAATCAGCCTTAATACATCTTCAATGA
TATACATGTTGCCTTTTGGACTAAGTGGTGCCACAAGCATAAGAGTTTCAAATGAATTAG
GCGCTGGACGACCAAAAGCAGCTCGTATAGCAGCATATACTGCATTGTTCTTAGCTACTA
CAGAAGGAATTCTAGTAGCAATGTTTATCATTTCGATTCGTAAATTTTGGGGGCATTGCT
ACAGCAATGAGGAAGAAGTAGTAACATATGTATCTGAAATGTTGATGTTTATAGCAGGAT
CACACTTCATAGATGCAAATCAATCTGTACTTTCAGGTATTGCTAGAGGATGTGGTTGGC
AAAAAATAGGTGCAATTGTTAATTTGGGAGCTTATTATCTATGGGGAATACCTGCTGGTA
TTGTATTAGGTTTTTTCTACCATGTTGGAGGAAAGGGACTTTGGTTGGGACTCACTCTAT
CACTTCTTGCTCAAGCCCTCATTTATTTAGTAGTTACACTCCGAACAAATTGGGACAAAG
AGGCAAAGAAAGCAGCTGATAGGGTGATTCCAGAGTTAGCATAGAAGAAAATGTTTTAAA
GAAGATCTACAAATGGTTTAGTTTTGGGACAATTTTGTTCTTGTTTTAGTTTTGAAAAAA
TAAATGTGAATATTTTGATTTTGTTTGGTTACATAATTTTTGGAATTGGGAGGTATGAAC
TTCCTAATGACAAGTTTCCTTTTCAACAAAGTTACTTTCGCCGTCAGAATTTAAA
