Microarray Probes on PGSC0003DMT400065416
Probe ID | Chip | Probe Sequence |
---|
CUST_50045_PI426222305 |
JHI_St_60k_v1 |
TACCATGTTGGAGGAAAGGCAAAGAAAGCAGCTGATAGGGTGATTCCAGAGTTAGCATAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400065416
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400065416 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT5G52450.1 |
+1 |
3e-175 |
504 |
260/406 (64%) |
MATE efflux family protein | chr5:21289042-21291749 REVERSE LENGTH=486 |
Transcript Sequence (1347 bp)
>PGSC0003DMT400065416 1347 pgsc_dm_v3.4
ATGGATATTCAAGATATTGAGTGTCCACTAATATCAAAATCAAGAAATGAAGAATCCAAG
AATAAGAGAAAATGTGATGATTTTCTTGAAGAAGTTAAGAAGATTTTGGCATTAGCAGGG
CCTTTAATGTCAGTTAATTTTCTTCTATATTGCTTACAGGTGATTTCAGTTATGTTTGTT
GGTCATCTTGGAGAGTTAGCTCTTTCTGGTGCTTCAATGGCTACTTCATTTGCCACTGTC
ACTGGCTTCAGCTTGTTGATGGGAATGGGAAGTGCATTGGACACAATTTGTGGGCAAGCA
TATGGTGCAAAGCAATATCATATGCTTGGTATCCATATGCAAAGGGCCATGATAGTTCTT
CTTTTAGTCAGCATTCCCTTAGCCTTTATTTGGGCAAATGCAGGACATATTCTTGAAATC
TTGGGACAAAGTCCGGAAATTGCAGCCGAAGCAGGGGATTATGCACGTTTCATGATACCG
AGCATCTTTGCCTATGCACTACTACAATGTCAGATGAGATTTCTACAAGCTCAAAACGAC
GTCCTCCCTATGATGCTTACTGCAGGAGCCACAACTTTGCTGCATTTATTCACTTGTTGG
TTTCTCGTGCTAAAAACCGGCCTTGGCAACAAAGGGGCTGCTCTGGCTAATGCTGCGTCT
TACTGGATTAACGTGTTCTTGCTAGCTGCATATATTGGGATATCGCCTTCTTGCAAAAGT
ACTTGGACTGGATTTTCAGTTGTAGCATTTTCTGATATCCCGAGATACCTTACACTAGCT
ATTCCTTCAGCCGTTATGGTTTGCTTGGAGAGTTGGTCATTCGAAATGATGGTTCTGTTA
TCTGGTCTTCTTCCTAATCCGAAACTAGAAACCTCAGTTCTTTCAATCAGCCTTAATACA
TCTTCAATGATATACATGTTGCCTTTTGGACTAAGTGGTGCCACAAGCATAAGAGTTTCA
AATGAATTAGGCGCTGGACGACCAAAAGCAGCTCGTATAGCAGCATATACTGCATTGTTC
TTAGCTACTACAGAAGGAATTCTAGTAGCAATGTTTATCATTTCGATTCGTAAATTTTGG
GGGCATTGCTACAGCAATGAGGAAGAAGTAGTAACATATGTATCTGAAATGTTGATGTTT
ATAGCAGGATCACACTTCATAGATGCAAATCAATCTGTACTTTCAGGTATTGCTAGAGGA
TGTGGTTGGCAAAAAATAGGTGCAATTGTTAATTTGGGAGCTTATTATCTATGGGGAATA
CCTGCTGGTATTGTATTAGGTTTTTTCTACCATGTTGGAGGAAAGGCAAAGAAAGCAGCT
GATAGGGTGATTCCAGAGTTAGCATAG