Microarray Probes on PGSC0003DMT400065328
Probe ID | Chip | Probe Sequence |
---|
CUST_9915_PI426222305 |
JHI_St_60k_v1 |
CTTTGTTAGACAATTCTAAAGGTGATGGACAAACAGATAGAGCAAGAAATGGAATGAACT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400065328
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400065328 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G68570.1 |
+3 |
4e-161 |
485 |
252/469 (54%) |
Major facilitator superfamily protein | chr1:25746811-25750110 FORWARD LENGTH=596 |
Transcript Sequence (2445 bp)
>PGSC0003DMT400065328 2445 pgsc_dm_v3.4
TTTAACTTTAAAATATCTATTTTACACTAAATGAAATGATTTATAGCCACACATTCTATC
ATTCATTTTAGACTATAAGTTTTAAAAGTATTCCTTTCTTTCATAAACTTTGTGCCGAGT
AAAACTACCTCACATGAAATGTGACAGAGGAAGTAATATTTTTCATGAGTTTTTATTTTT
TGGAAAATTTAAAATCATTATGGCTTATAACTTCATCTGACTATTCCTAAAGTCATACCT
AATATGGATATTCATATTTTTTTGTCGATTAACCTATATTTTTTAATACATTGAGTCAGA
TATTTTATTCATTTTTGGCCAATCCATATATGATTCGACCCACTCGTTTCCACTCCTAGA
TACATGGCTTTTTCTTAAAGAGCCTATTTTGTAGGTTATAGATTTTTATTTTTTTTTTAA
AATCCAAGTACTATTTGCAGAAAAAACAATCTTTCCATATAAAATGAAAGAATTATTGGA
ATAGATTTGATACATTTGGAGTATTATATAGAAGTTGTTAACAAGTTTTAGATTTAAAGC
TTTCTTTTGATTTGTTTTGGCTTTAGGACACTAATATGCTTGAGCCACCCCTGCTTTGTC
ATTTTCCATTCGAATATGTTAACAGCCTGAGCAACAAGGAACTATGAATTAGGATAATCC
GTAGCTAAATAAGATTAACAAACGATTTTGCTGTTTATCTATAAAATTTGTCCATACAGA
GTCCCCTGATTTTTATAGTACCCATGGAAATCCTACTTTGAGATGTGTATATACAGGGAC
TGATCAGCATAACTATCTCAGCAATCATGCCACAACTCCGTCCTCCACCTTGTCCAACTC
AGGAGAATTGCAAAGAAGCTTCGAATTCACAGCTTTGGGCACTCTACATTTGCCTACTTT
TGACATCTATTGGTACAGGAGGCCTTAGACCTTGTGTAGTTACCTTTGCTGCTGATCAAT
TGGACATGAGGAAATCTAAAGTAGAATCGCGAAAGTGGAACTTTTATAATTTGTTCTATT
TCTGTGTCACAATGGCTACGTTAACTGCATTAACTGTTGTCGTTTATATACAAGATAACG
TAAATTGGGGATGGGGTCTTGGACTTCTAACAATTGCTATGGCATTGTCTGTTGTCGTGT
TTGTTGTTGGATCTCCATTTTACAGAAAAGTAGAACCAGGAGGAAGTCCATTAATCAGAT
TGACACAGGTTATTGTTGCCTCAGTGAGGAAGAGAAAAGTCGTTGTTCCAGACGATGATC
GTCTCTTATATGAGAACAGAGAGCTTGATTCTGCTATCTCACATGATGGAAGGCTTTTGC
ATACTAATCAGTTCAAGTGGATTGATCGATCAGCTGTAGTAACCGGCGATGACATGAAAG
AGTCGTGCCAGCCAAATTTATGGAGGCTAGCTACCGTTCATAGAACGGAAGAGCTGAAAT
GCATCCTAAGGATGCTTCCGATTTGGGCTGCAGGGATATTACATTTTGCTTCACATTCAC
ATGTAGGCAGCTTTACAATCCAACAGGCGCGAAGTATGGATCGTCATTTGTCCCACAGCT
TCCAAATACCTCCAGCCAGCATGTCTATTTTTAGCGTCCTAACGGTGCTCATTGGCCTTG
TGCTTTATGAGCGCTTCTTTGTTCCTTTTGCTCGTCGATTCACAGGACACAAATCAGGCA
TTACATGCTTACAGAGAATGGGAATAGGATTCGCCATTAATATTCTTGCTACTGCAACTT
CAGCACTAGCTGAGATTAAGCGTAAAACGGCAGCTGCAGATCATAACTTACTTGATCAGC
CAACGACTCATGTCATTCCTATTAGTGTCTTCTGGTTGGTTCCGCAGTATTGTCTTCACG
GTGTAGCTGAAGTTTTCATGAGTGTTGGACACCTTGAATTTCTCATTGAACAATTCCCTG
AAAGCATGAGAAGCACTGGAGCTGCACTTAACTCGTTAGCTTCGTCGTTTGGAAATTACT
TAGGTACATTTATAGTAACTCTAGTTCATCGATATACCGGAAAAGAAAGGAATTGGCTAC
CAGATAGGAATCTCAACAGAGGAAGACTTGAAAACTTTTACTGGCTTATGGCTGGAGTAC
AAGTAGTAAATTTTGTATACTATCTTATATGTGCATCATTATATACATACAAACCCTTGG
AAGAGATTACTGAAGGATGCAAGGGAACAGATGTGGAATTAGCTGATGAAACAACTTTGT
TAGACAATTCTAAAGGTGATGGACAAACAGATAGAGCAAGAAATGGAATGAACTAATATA
TTGCTTAGTTAAACTAGTAGAAATTTTATTTTTCAAGTTTTAGCTGTCACAAGTTGATAC
TGTTAAATGTACCAAAAATAAAGGTTGAAACTATTTCAACCTCTGTCTCAATTGATGTGA
CACATTTCAATTTTTGAGATTCGAACAAGTCTATTTTTGACCATA