Microarray Probes on PGSC0003DMT400065325
Probe ID | Chip | Probe Sequence |
---|
CUST_9966_PI426222305 |
JHI_St_60k_v1 |
CTTTGTTAGACAATTCTAAAGGTGATGGACAAACAGATAGAGCAAGAAATGGAATGAACT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400065325
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400065325 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G68570.1 |
+2 |
1e-98 |
322 |
156/283 (55%) |
Major facilitator superfamily protein | chr1:25746811-25750110 FORWARD LENGTH=596 |
Transcript Sequence (2538 bp)
>PGSC0003DMT400065325 2538 pgsc_dm_v3.4
AGAGAAGCAAAAAAGGTGACCAAATACTTCCAAATGAAAACCAATGGATGAGACAAATTA
ACATGGGGCTAAGAATGTCAATAAATATCCCCTACATCTATAGGGAATTTCTCAAAATTG
CTTGCATTTCATAACTAAGAGTAGCTAGTCACGATGAGTGAAAATATGAAGGTGGCCAAG
CAAGAGCTAGTTGTTCAAGAAAATGGCAAGAAAGAAGAAGATGAGACAATTGAAACTGAA
AAAAGGAAGCTTGGAGGAATGAAAACAATGCCCTTTATACTTGCAAATGAAGTATGTGAC
AGATTTGTGGGTGCTGGATTTCATAGCAACTTGATAACATACCTAACACAAGTGCTAAAT
GTGCCTTTAATAAAAGCATCAAATACACTAGCCAACTTTAGTGGTGTTTCAAATTTCACT
CCACTTATTGGTGCTCTTGTTGCTGATTCATTTGCTGGTCGATTTTGGACTATTATTGTT
GCTTCCATTATTTATGAAATGGGACTGATCAGCATAACTATCTCAGCAATCATGCCACAA
CTCCGTCCTCCACCTTGTCCAACTCAGGAGAATTGCAAAGAAGCTTCGAATTCACAGCTT
TGGGCACTCTACATTTGCCTACTTTTGACATCTATTGGTACAGGAGGCCTTAGACCTTGT
GTAGTTACCTTTGCTGCTGATCAATTGGACATGAGGAAATCTAAAGTAGAATCGCGAAAG
TGGAACTTTTATAATTTGTTCTATTTCTGTGTCACAATGGCTACGTTAACTGCATTAACT
GTTGTCGTTTATATACAAGATAACGTAAATTGGGGATGGGGTCTTGGACTTCTAACAATT
GCTATGGCATTGTCTGTTGTCGTGTTTGTTGTTGGATCTCCATTTTACAGAAAAGTAGAA
CCAGGAGGAAGTCCATTAATCAGATTGACACAGGTTATTGTTGCCTCAGTGAGGAAGAGA
AAAGTCGTTGTTCCAGACGATGATCGTCTCTTATATGAGAACAGAGAGCTTGATTCTGCT
ATCTCACATGATGGAAGGCTTTTGCATACTAATCAGTTCAAGTAAGGTGATTTAAAGTAA
CGTTTGATGAACGCGAATATGTAGCATAGATAGAATAGCTAAAAGAAATGGACAGATAAA
ATTAACTTGCAAAAAGAATGAATCAATACATATTCTAGTTTTTAAATTATGAGTTTATGA
ATACAACTTGCATATAAATTATGCTCTTTTAGTTAATTTGGTTCACAACTTATATCATCT
TTTATTGTTAACTTGATTTCTCAGATGGTTACTCCGTTAATAGTTATTATTTCAGAAAGT
CATGAAAATATTGAAATCTAAGAAAAAAAAGATTTTCTGATATAATAACTATTAGTTGAG
TGATCATTGACCGTGTTATTGCTTTACTAATTCAACCAATTGGTTAAGGTGGATTGATCG
ATCAGCTGTAGTAACCGGCGATGACATGAAAGAGTCGTGCCAGCCAAATTTATGGAGGCT
AGCTACCGTTCATAGAACGGAAGAGCTGAAATGCATCCTAAGGATGCTTCCGATTTGGGC
TGCAGGGATATTACATTTTGCTTCACATTCACATGTAGGCAGCTTTACAATCCAACAGGC
GCGAAGTATGGATCGTCATTTGTCCCACAGCTTCCAAATACCTCCAGCCAGCATGTCTAT
TTTTAGCGTCCTAACGGTGCTCATTGGCCTTGTGCTTTATGAGCGCTTCTTTGTTCCTTT
TGCTCGTCGATTCACAGGACACAAATCAGGCATTACATGCTTACAGAGAATGGGAATAGG
ATTCGCCATTAATATTCTTGCTACTGCAACTTCAGCACTAGCTGAGATTAAGCGTAAAAC
GGCAGCTGCAGATCATAACTTACTTGATCAGCCAACGACTCATGTCATTCCTATTAGTGT
CTTCTGGTTGGTTCCGCAGTATTGTCTTCACGGTGTAGCTGAAGTTTTCATGAGTGTTGG
ACACCTTGAATTTCTCATTGAACAATTCCCTGAAAGCATGAGAAGCACTGGAGCTGCACT
TAACTCGTTAGCTTCGTCGTTTGGAAATTACTTAGGTACATTTATAGTAACTCTAGTTCA
TCGATATACCGGAAAAGAAAGGAATTGGCTACCAGATAGGAATCTCAACAGAGGAAGACT
TGAAAACTTTTACTGGCTTATGGCTGGAGTACAAGTAGTAAATTTTGTATACTATCTTAT
ATGTGCATCATTATATACATACAAACCCTTGGAAGAGATTACTGAAGGATGCAAGGGAAC
AGATGTGGAATTAGCTGATGAAACAACTTTGTTAGACAATTCTAAAGGTGATGGACAAAC
AGATAGAGCAAGAAATGGAATGAACTAATATATTGCTTAGTTAAACTAGTAGAAATTTTA
TTTTTCAAGTTTTAGCTGTCACAAGTTGATACTGTTAAATGTACCAAAAATAAAGGTTGA
AACTATTTCAACCTCTGTCTCAATTGATGTGACACATTTCAATTTTTGAGATTCGAACAA
GTCTATTTTTGACCATAA