Microarray Probes on PGSC0003DMT400064773
Probe ID | Chip | Probe Sequence |
---|
CUST_47440_PI426222305 |
JHI_St_60k_v1 |
CCAATTCCGTTCCAGTACGGTAAGGCTAAAGAAGATATATATCATAGTCCAAAGTCATGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400064773
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400064773 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT5G42650.1 |
+1 |
1e-113 |
348 |
173/346 (50%) |
allene oxide synthase | chr5:17097803-17099359 REVERSE LENGTH=518 |
Transcript Sequence (1368 bp)
>PGSC0003DMT400064773 1368 pgsc_dm_v3.4
ATGTCTTCAATTTTCTCCAAATCTTCCGCCATTGTTAACTCTTCAGACAATGAGTCTTGT
AAACCACTCCTTCAAGTTCGAGAAATCCCAGGTGACTATGGTTTCCCATTCTTCGGAGCT
ATTAAAGATAGATATGACTACTACTACAGCCTCGGAGCGGACGAATTCTTCCGTACAAAA
TCCCTAAAGTATAATTCTACTGTATTCAGAACAAACATGCCACCAGGTCCATTTATTGCT
AAAGATCCCAAAGTCATCGTTCTTCTCGATGCTATAAGTTTTCCTATTCTTTTCGACTGT
TCAAAAGTCGAAAAGAAGAACGTTCTTGATGGCACCTTCATGCCATCAACTGATTTCTTC
GGTGGATATCGTCCTTGTGCATTTCTCGATGCATCAGAACCAAAACATGCAACACATAAA
GGGTTTTATTTATCTATAATCTCAAAATTGCATACTCAATTTATTCCTATATTTAAAAAC
TCTGTTTCTGTCCTGTTTCAAAATCTTGAAATTGAAATGTCTAAAAATATGAAAGGAAAT
TTCAACGACATTAGCGATGCAATGTCATTTGATTTCGTTTTTCGTTTGTTGTGTAACAAC
ACAAATCCCCATGACACAAATCTTGGCACTAATGGACCAAAATGTTTTGATTTATGGATG
TTGCCTCAACTGGCTCCATTGGTCACTATTGGTCTAAAATTTGTGCCCAATTTTCTGGAA
GATTTGATGTTGCATACTTTCCAATTGCCGTTTTTTCTAATTAAATCGAAATACCAGAAG
CTTTACGATGCTTTTAACGAGCATGCTGGAAGTACACTTGATGATGCTGAGAAGAGTGGG
ATCAAAAGAGATGAAGCTTGTCACAACTTAGTTTTTCTTGCAGGATTCAACGCTTATGGT
GGAATGAAAATTTTGTTTCCGTCACTGATGAAGTGGGTGGCAAGTGGAGGAAAGAGTTTA
CACACTCGTCTAGCAAATGAAATCAGGACGATCATCAAGGAGGAAGGTGGGTCCATTACT
CTATCAGCAATCAACAAGATGAGTTTGATTAAATCAACGGTGTATGAAGTGTTAAGAATT
GAACCACCAATTCCGTTCCAGTACGGATTCAACGCTTATGGTGGAATGAAAATTTTGTTT
CCGTCACTGATAAAGTGGGTGGCAAGTGAAGGAAAGAGTTTACACACTCGTCTAGCAAAT
GAAATCAGGACGATCATCAAGGAAGAAGGTGGGTCCATTACTCTATCAGCAATCAACAAG
ATGAGTTTGATTAAATCAACGGTGTATGAAGTGTTAAGAATTGAACCACCAATTCCGTTC
CAGTACGGTAAGGCTAAAGAAGATATATATCATAGTCCAAAGTCATGA