Microarray Probes on PGSC0003DMT400064728
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_43608_PI426222305 |
JHI_St_60k_v1 |
AGCGCTGCTGAGCGTATATTTCTGTAATGTCCCTAATGGGAATATTTCATTCAGATGAAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400064728
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Source Transcript PGSC0003DMT400064728 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G29370.1 |
+3 |
2e-11 |
58 |
32/64 (50%) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G39240.1); Has 16 Blast hits to 16 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:11278652-11278957 FORWARD LENGTH=101 |
Transcript Sequence (563 bp)
>PGSC0003DMT400064728 563 pgsc_dm_v3.4
AGAAAATCCATTTTTCTCGGCTCCAAATGGGTTCACGGCCAAAAAACTCGAGTAGCTTGC
GGCTGAGAAGATCGAGAAGAAATTCTTCCAATGAAAAACGAGCAAAAAATGGAGTAGATA
ACAACAGTACCAATGCCGCCGGCGACGATAATTCCATTTCAATTTCAGAAAAATTGGAAG
CTCTGAAGCAACTTCTCCCAGTCAACAATGGCGAATTAAAAGCAGATCAGTTGTTCGAAG
AAACAGCTGGTTATATTGTTCTTCTCAGAACTCAAATCTTCGTTTTACAGAAACTGCTCG
ATTTTTGTGACGATGCATCTGGTCAGTCTCAACATATTAATGCTGTATAGTTAGTAGTAA
TTATTTCCTAATCAAACATTGCTCTCTTTTTTTTTCTTATAATTTTTATTCTTAGTAGTT
AGGTTCTCAATTGAAGGTGAGTAGTTATATGGTAGAGTTTTACATTTCTTTGAATCTGAG
TTTTAGCGCTGCTGAGCGTATATTTCTGTAATGTCCCTAATGGGAATATTTCATTCAGAT
GAATTATATATTATGCTTTAAAC
