Microarray Probes on PGSC0003DMT400064561
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_36520_PI426222305 |
JHI_St_60k_v1 |
TCCCCTTCCTTGCAATGTTGAGTCATCTTCAGGAGCCATAGAAGAGCAACAGAAGTTGTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400064561
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400064561 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G31150.1 |
+1 |
2e-12 |
69 |
65/259 (25%) |
Domain of unknown function (DUF1985) | chr1:11120097-11122412 FORWARD LENGTH=673 |
Transcript Sequence (1353 bp)
>PGSC0003DMT400064561 1353 pgsc_dm_v3.4
ATGGGAGGAAAAAATGATAAAGAAGATGAGGAGGAAGGTGAAAAAGAATGCGAGGAAGGA
GATGAAAATGAAAGTGATGAAAGAGATGATACTGAAAGTGAGGAAGGAGATGAAGATGTT
GTCAAAATTTTTAATATTGACAAGTTTCATGTAGAGATGCCTATAGATGACCCTACAAAT
TTGACAGGTGATTTTGTTGTAAAATCAGTCATGGGCGCCAAATTTGATGCTTTTAGAACG
ATATTGATGAATGAAAAGTTGGAGGATTTCTTTAAATCTAGCTGTTTTGGATACTTTCTT
GATTTGCCGGAGGCTAACAATGCACGTTTTCAAATGAGCATGGTGTATGATCTTCTCAAG
CACAGGATCAAGTATAAGGGAGCTGATGATGATGCTTTGGAGGATAAGAACAAGAAAATG
GATGAGATTTGGATAAACTACTGTGGCATGCCAGTTTGTTTTGGCATGAAAGAATTTGCC
ATAGTGACTGGACTGAGATGTCATCCTCCTTCTGAACCTCTTCCTAAAGTTGCACGCTTA
AGAAAGCCAAGAGAAAAAAAGATATCTAAATCAGTCAAGGTTGGCAAGAAAGGTAATAGG
TCAGTCAAGACAATCAACACCAAAACCAACAAAGGCAAAGAAAAACTAAATAATGAAAAT
GAGTTGTTGGCTATTATTGGACCTAGTTATAAAGCCAAAGATTTGATAGAAGATCTCCAG
AGCAAAAAGGTTTTGAAGAAGCACAAAGAGCGAATGTGCTTAGTTTGGTTTGTGCATGCC
ATTTTATGGGCCAAAGACATCAACAATGTCATAGATCTTAGTTTGTTTGTGCTTGCTCAA
GATTTGGATGCATTCAACAATTACCCATGGGGTAATGATAGTTATTTCTTGACTGTCGAG
TATTTGGTGTCAAAGTTATCACCGAAGACTAACAATTTATATGGCTTTCCTTGGGCTTTC
ATGGCTTGGGCATTTGAAGCAATACCTTACCTCAGGAAGCAATTCAATGATTACTCAAAA
GAAATTTCTCAACCAAGGATTCTTAGCTCATGTTCTGCATGTAAATGTGAAGAATGCAAG
AACAAAGAGGCTCAGTTAATATCTACTGGTGAAGATGTGAAGAAGTCTCTTGATACTCTT
ACTAGTGTTGTTAAGGAATTGATATCTAAGAGATGTGTTATTCCATCAAGAAAAATTTCG
GAGCCATTCACACCATTGAAGATTAAAAGGAGAAGAAAATCAATTTCCAAGATATTATCA
AATATGAAAAAAAGACAACAAATTGCAACTAATCCCCTTCCTTGCAATGTTGAGTCATCT
TCAGGAGCCATAGAAGAGCAACAGAAGTTGTAG
