Microarray Probes on PGSC0003DMT400064554
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_36514_PI426222305 |
JHI_St_60k_v1 |
AAGTTGTGTCTTGCTCTGATATTACTGCCATTGCTGCTAGGGACTCTGTTGTTTTGACGG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400064554
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400064554 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G71695.1 |
+3 |
3e-140 |
409 |
191/292 (65%) |
Peroxidase superfamily protein | chr1:26964359-26966557 FORWARD LENGTH=358 |
Transcript Sequence (1277 bp)
>PGSC0003DMT400064554 1277 pgsc_dm_v3.4
ATTGTACCAATTAATTAGCTAAATCAAACTATCTAGCTATAGCCATGGTGTCAACTACTC
TATCAAGTTTTCTACTTGTTCTTCTTGTTTCTTTCTTTGTCACAGAAGCTCAAAGGCCTG
CTTTAACAAAAGGTCTTTCATGGTCATTTTATCAATCTAGTTGTCCTCAACTTGAATCCA
TTATTAGAAAGAGGCTTGAAAAACAAATTAAGGATGATGTTGGCCAAGCTGCTGGCTTAC
TTCGTCTTCATTTCCACGATTGCTTTGTTCAGGGGTGTGATGGTTCAGTGTTGCTAGATG
GATCAGCAGGAGGGCCAAGTGAGCAAACTGCAGTTCCAAATTTGACCCTAAGAAAGAGGT
CATTCAAGATAATTGATGATCTTAGAAAAAGGATCCAAGATGAGTGTGGTCAAGTTGTGT
CTTGCTCTGATATTACTGCCATTGCTGCTAGGGACTCTGTTGTTTTGACGGGTGGGCCCA
ACTACGATGTACCCTTAGGAAGAAAGGACGGAGTCAACTTTGCAACGGAGCAAGCGACGA
TAGACAACCTAGTTGCACCCTTTGCCAACACCACAACCGTCCTCTCTCTCCTTGCAACCA
AAGGCCTCGATGCGACCGATGCGGTCGCGTTGTCCGGGGCCCACACTATCGGTATCAGCC
ACTGTCCTTCCTTCACCGACCGTCTCTACCCAAACCAAGATTCCACTATGGACAAGACAT
TTGCTAACAACCTCAAAGGTAGTTGTCCCACAGCTGACTCGAACAACACGGTCAACATGG
ACATTCGTAGCCCTAATGTGTTTGACAACAAGTACTACGTTGATCTCATGAATAGACAAG
GGCTTTTTACGTCTGATCAAGATTTGTATACGGATCGAAGAACTCGAGGGATTGTTACGA
GCTTTGCGGTGAATCAATCGTTGTTTTATGAGAAATTTGTTATTGGTATGATTAAAATGG
GACAAATGAATGTGTTGACTGGTGGAAATGGTGAAATTAGGAATAGGTGTGATAGGAGGA
ATAAGGATAAAAAGGTTGATATTGCTACTGTTGTTGAAGAATTGGAGGAAACTTTCTCTG
CTTTGTTCTAAGTTTAATTTAATTAGTCGTTTTTGTTTTGGTTTTGTTGTAATAATAATG
TGTCTTAACTAGCTTATAGTATAATAATCACATTTTGTTTTGTGATGTAATGTAAGAAGA
TGGTGTTTTGGATCTCTTCTCAAAATGTTTTCTAGCTCCATGATGATATCAAAATTGTGT
TACTAGTATAACCTCTC
