Microarray Probes on PGSC0003DMT400064187
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_3537_PI426222305 |
JHI_St_60k_v1 |
GTGTTGTGTTTGCTACTGCTTGGGTTCCTCTTTAGTTAATTAATTTCATTTGACTTAGCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400064187
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400064187 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G49950.1 |
+3 |
2e-172 |
500 |
252/406 (62%) |
GRAS family transcription factor | chr3:18522570-18523802 FORWARD LENGTH=410 |
Transcript Sequence (1855 bp)
>PGSC0003DMT400064187 1855 pgsc_dm_v3.4
CCAAAATCCATCAGAAATCTCACCTTTAATTTTCTCTCTCTCTCTGCCTCTGATAAAGAA
GATGCAGTGCTATTAATCCGTTTTGTAGCCTTTGTAAAGCTTTTTCTTATGAGAAGTCCT
TATTCATGCCAACCAGTCTCTCTTTTGCCTCAATTTTGACTTTAACAGCTGATCGACGAG
ATATATATATATATATTGAGATTTTCTCCACCAGTCATTTTACTCTTTAAACAAAAAAGT
TGAACAGTCAATTATTGTTGATTCATTTCCAGAATATTGCAAAAAGTTCTCTCTGCACTG
CTATTAGCCACTAGCAAACCAATAATGGATCGCTTCCCAATAATATTGTTCAGGTACCAC
TACTACTAGTCTAGTCTTTTTCTCTTGTCTTCTCTACTTATTTCTCAAAAAAAAAAAGTT
CATTTGGAAATACTTTTCTCTAATTCCTTCCTCTCATGATGCAATTTACTGAGAGTTTAC
CTCCACAAGTTTCATCATTTTCAAGTTTGATGATGAATAAGAATAGTAATACTAATAATA
ATCAGATCCAACACGCGCGCCCATGGCCTGGTTTTCACACATCGAAGAATTTGGGAAACA
TTGGGGATACTAATTGCATGGAACAGTTGTTAGTCCATTGCGCCAATGCCATCGACAGCA
ATGACGCAACTTTAGCACAACAAATATTGTGGGTCCTTAATAACATTGCCCCTCCTGATG
GTGACTCGAACCAACGCCTAACTTGTGGATTCCTCCGAGCCCTAATTCTTCGTGCTGCGA
AAATTGGGACCTGCAAATTACTCACTTCTAATCTGAATCATTCCATGGAAACTCATAAAT
TCTCCATTATTGAGCTTGCAAGTTTCGTTGACTTAACCCCGTGGCATCGGTTCGGGTTCA
CGGCTGCTAACGGAGCTATATTAGAAGCTGTGGAAGGTTACTCTATTATTCACATTGTTG
ATTTTAGCTTAACTCATTGCATGCAAATTCCAACACTTATAGATGCAATTTCTACTCGAG
TAGAAGGACCGCCGTTAATCAAACTAACGGTAGCTGGTGCAACCGAAGATTTACCGCCTA
TGCTTGATCTTTCTTACGAAGAATTAGGTGCTAAATTGGTAAATTTCGCAAGGTCACGAA
ATGTCATGATGGAATTTAGAGTAATTCCTTCAAGTTCATCAGATGGTTTTTCGAATGTAT
TCGAACAGCTACGTGTCCAAAATCTAATACGTCCTGATAATGGCGAAGCACTAGTAATAA
ACTGTCACATGATGCTTCATTACATACCAGAGGAAACAACGGTTCTTTCCAATTCGTTCC
GTGCCATGTTTCTTAAGGCCATTCGGAATTTGGACCCAACGATTGTTGTGCTAGTAGATG
AAGACGCGGATTTTACTTCTAATAATCTCGTGTGCAGATTAAGATCCGCGTTTAATTATT
TATGGATACCTTATGATACAGTGGATACATTTCTTCCGCGAGGGAGCAAGCAAAGGCAGT
GGTACGAAGCGGATATTTGCTGGAAGATTGAGAATGTGATAGCTCAGGAGGGTATACAAC
GACTAGAAAGGCTGGAGCCGAAGAGTCAGTGGGTGCAACGGATGAGAAATGCAAATTTCA
GGAGCAGTGGATTTAGTGAAGAGGGAGTTACGGAAGTGAAGAACATGTTGGATGAGCATG
CAGCTGGGTGGGGGCTAAAGAGGGATGAAGAAGATCTTGTGCTTACATGGAAAGGACATA
GTGTTGTGTTTGCTACTGCTTGGGTTCCTCTTTAGTTAATTAATTTCATTTGACTTAGCT
ATTAACTTTTGTTTTATTTTATCTCGATCAAATCTTCTTGATTATTACTCCATTC
