Microarray Probes on PGSC0003DMT400064096
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_19937_PI426222305 |
JHI_St_60k_v1 |
GCAAGATCAATGTTGGGTTGATCCATTTCAAAGTCAAGAAAAAAGAAAAACAGGCACATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400064096
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400064096 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G18530.1 |
+1 |
1e-162 |
478 |
235/411 (57%) |
Protein of unknown function (DUF707) | chr4:10217749-10220285 FORWARD LENGTH=389 |
Transcript Sequence (2123 bp)
>PGSC0003DMT400064096 2123 pgsc_dm_v3.4
AAACAACTTTCTTCTATCTATCTTTATTTATACACCTATAATATAATATACATACAGGAA
CTGTATGTAGAGGTCTGGTTTCTTGAAAGATTTGAAGAGGGAGCGACATCGTTTGAGCGG
TTTTGAAAGTGATTGAATATTCAAAACATCCTTTTTAGTTCATTCTTTCTTTAGAATTTG
GTTTTTCTGTTTTTGATCCGTTGCTTTACCTATAAGGACTATTCGACTTTCTTTCTTTGA
AAAAGTTTATCTTTTTGTCTTTCTTTTTTTCTTACCCTTTTGTCAGCAAATCTTGATAAC
AAAGACCCTTGTTGTGGATTGGATTTTTGGAGCTTTATTCATGCAAAGATGAAGTCTTGG
AACATTGTTTCTGTGCCTGATGCTAAAAGCAGATCATGTATCTGCAGCCTCTTCTTGACT
CTTGCTTTAATTTGTGCGGTCTACTTTACCGGAAGTGCTTTGATGGCTAAGGATTTCAGG
GCTTTTTCAGGTTTTACAATGAACAGTACAAAGCAGAATGGACAATGCGGAAAATGCAAG
GTACCACCTCCAAGAGAAGAAAAACAAGAGAGTCATGTGACAGAGAATGTGCAAAATAAT
AAATGCCAGAAAAAGTGCAGGCCATTAGGGAGTGAGGCACTCCCAGAAGGAATTATTTCT
AAAACATCAAACCTGGAAATGCGACCATTGTGGGGTGATGTTGAGAAGAAGTCTCCACAT
TCAGTTAACTTATTGGGAATTGCAGTTGGAATAAAGCAAAAAGAGATGGTGAACAAAATT
GTTAAAAAGTTTCTTGAACATGACTTTGTTGTGATGCTTTTCCACTATGACGGTGTGGTG
GATGAGTGGAATGATCTTGAGTGGAGTAATCGTGCCATACATGTATCTGCTATGAACCAA
ACAAAATGGTGGTTCGCGAAAAGGTTTCTGCACCCGGATATAGTTTCTGAATACGACTAT
ATTTTCTTGTGGGATGAGGACCTTGGAGTCGAAAACTTTCATCCGGAAAAGTATATATCT
ATTGTTAGAGAAGAAGGGCTGGAGATATCACAGCCAGGACTTGATGCTAGTAAATCGGAA
GTACATCATCATATTACTGTGCGCAGAGGGAGATCCAAGGTGCACAGGAGGTTCTACAGA
TTAAATAGAGGTGGCCGAACATGTGATAATAACAGCACAGAACCTCCTTGTGTGGGGTGG
GTAGAAATGATGGCTCCGGTATTCTCAAAAGCCGCTTGGCGTTGTGCTTGGTATATGGTC
CAGAACGACCTGATCCATGCATGGGGATTGGATATGAAGCTTGGTTATTGTGCGCAGGGC
GATCGTACCAAGAAAGTTGGCGTGGTTGATGCAGAGTACATAACTCATTTGGCTGTCCCT
TCTCTGGGTGGTAATTCAGATGTAGAAACGGTGATCAAAGAATTAGATAATAATTCACTG
CAAGGGAAGAACTTGTCTGATTCTGATACATTGGCTGCTCCAGTTGAGAAATTTGACAAT
CGGTCTCTGGTTAGGAGACAATCGTATATCGAAATGAAGGTTTTTCGAGAGAGATGGCGT
AAAGCCATCAAGCAAGATCAATGTTGGGTTGATCCATTTCAAAGTCAAGAAAAAAGAAAA
ACAGGCACATAATGAAATTTCTCATAAGTTATATACATTCAGTTGTTTGTATATACATTG
TATACAAAGAGCAGCTAAGAGTAAATAGCCATACAAGACTGATATCTATATGCATCAAGA
GCCACAGTTACTCAGAAGAGAGAGGGGTGGTGTGTGGATGTGGAAAATTCAGTCATCTTT
CTTTTTTTCCCTTTGGGAATCATTTTTATAGATAAATTTTGTGGTATTTGTAAATACCAT
TTTTTTTCTTCTTTTCCTTTTTTTTTTGGGGGTCTAAGAATAATGCCAAGGGTGCTGTAT
AGTTATGTTTATTTATGGCATTCAATTTGGTGATTTGTTTCAGGTCAACAATAAGATTTA
TTGCTCATAATTACTGCCTCTTGGCACACTTGCATTGTATCTTGCTATTTTGCCGTCAGA
TTATTCTTGCAATCCTCTTTGAAAACAGTGAGGATTTATCGAAAACAATCTCTTTAACCC
AAAGGTAGAAAGGTTTGCGTTCA
