Microarray Probes on PGSC0003DMT400064095
Probe ID | Chip | Probe Sequence |
---|
CUST_19855_PI426222305 |
JHI_St_60k_v1 |
GCAAGATCAATGTTGGGTTGATCCATTTCAAAGTCAAGAAAAAAGAAAAACAGGCACATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400064095
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400064095 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT4G18530.1 |
+2 |
2e-161 |
473 |
234/411 (57%) |
Protein of unknown function (DUF707) | chr4:10217749-10220285 FORWARD LENGTH=389 |
Transcript Sequence (1962 bp)
>PGSC0003DMT400064095 1962 pgsc_dm_v3.4
AAACAACTTTCTTCTATCTATCTTTATTTATACACCTATAATATAATATACATACAGGAA
CTGTATGTAGAGGTCTGGTTTCTTGAAAGATTTGAAGAGGGAGCGACATCGTTTGAGCGG
TTTTGAAACAAATCTTGATAACAAAGACCCTTGTTGTGGATTGGATTTTTGGAGCTTTAT
TCATGCAAAGATGAAGTCTTGGAACATTGTTTCTGTGCCTGATGCTAAAAGCAGATCATG
TATCTGCAGCCTCTTCTTGACTCTTGCTTTAATTTGTGCGGTCTACTTTACCGGAAGTGC
TTTGATGGCTAAGGATTTCAGGGCTTTTTCAGGTTTTACAATGAACAGTACAAAGCAGAA
TGGACAATGCGGAAAATGCAAGGTACCACCTCCAAGAGAAGAAAAACAAGAGAGTCATGT
GACAGAGAATGTGCAAAATAATAAATGCCAGAAAAAGTGCAGGCCATTAGGGAGTGAGGC
ACTCCCAGAAGGAATTATTTCTAAAACATCAAACCTGGAAATGCGACCATTGTGGGGTGA
TGTTGAGAAGTCTCCACATTCAGTTAACTTATTGGGAATTGCAGTTGGAATAAAGCAAAA
AGAGATGGTGAACAAAATTGTTAAAAAGTTTCTTGAACATGACTTTGTTGTGATGCTTTT
CCACTATGACGGTGTGGTGGATGAGTGGAATGATCTTGAGTGGAGTAATCGTGCCATACA
TGTATCTGCTATGAACCAAACAAAATGGTGGTTCGCGAAAAGGTTTCTGCACCCGGATAT
AGTTTCTGAATACGACTATATTTTCTTGTGGGATGAGGACCTTGGAGTCGAAAACTTTCA
TCCGGAAAAGTATATATCTATTGTTAGAGAAGAAGGGCTGGAGATATCACAGCCAGGACT
TGATGCTAGTAAATCGGAAGTACATCATCATATTACTGTGCGCAGAGGGAGATCCAAGGT
GCACAGGAGGTTCTACAGATTAAATAGAGGTGGCCGAACATGTGATAATAACAGCACAGA
ACCTCCTTGTGTGGGGTGGGTAGAAATGATGGCTCCGGTATTCTCAAAAGCCGCTTGGCG
TTGTGCTTGGTATATGGTCCAGAACGACCTGATCCATGCATGGGGATTGGATATGAAGCT
TGGTTATTGTGCGCAGGGCGATCGTACCAAGAAAGTTGGCGTGGTTGATGCAGAGTACAT
AACTCATTTGGCTGTCCCTTCTCTGGGTGGTAATTCAGATGTAGAAACGGTGATCAAAGA
ATTAGATAATAATTCACTGCAAGGGAAGAACTTGTCTGATTCTGATACATTGGCTGCTCC
AGTTGAGAAATTTGACAATCGGTCTCTGGTTAGGAGACAATCGTATATCGAAATGAAGGT
TTTTCGAGAGAGATGGCGTAAAGCCATCAAGCAAGATCAATGTTGGGTTGATCCATTTCA
AAGTCAAGAAAAAAGAAAAACAGGCACATAATGAAATTTCTCATAAGTTATATACATTCA
GTTGTTTGTATATACATTGTATACAAAGAGCAGCTAAGAGTAAATAGCCATACAAGACTG
ATATCTATATGCATCAAGAGCCACAGTTACTCAGAAGAGAGAGGGGTGGTGTGTGGATGT
GGAAAATTCAGTCATCTTTCTTTTTTTCCCTTTGGGAATCATTTTTATAGATAAATTTTG
TGGTATTTGTAAATACCATTTTTTTTCTTCTTTTCCTTTTTTTTTTGGGGGTCTAAGAAT
AATGCCAAGGGTGCTGTATAGTTATGTTTATTTATGGCATTCAATTTGGTGATTTGTTTC
AGGTCAACAATAAGATTTATTGCTCATAATTACTGCCTCTTGGCACACTTGCATTGTATC
TTGCTATTTTGCCGTCAGATTATTCTTGCAATCCTCTTTGAAAACAGTGAGGATTTATCG
AAAACAATCTCTTTAACCCAAAGGTAGAAAGGTTTGCGTTCA