Microarray Probes on PGSC0003DMT400064093
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_19684_PI426222305 |
JHI_St_60k_v1 |
GCAAGATCAATGTTGGGTTGATCCATTTCAAAGTCAAGAAAAAAGAAAAACAGGCACATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400064093
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400064093 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G18530.1 |
+3 |
2e-64 |
177 |
79/105 (75%) |
Protein of unknown function (DUF707) | chr4:10217749-10220285 FORWARD LENGTH=389 |
Transcript Sequence (1275 bp)
>PGSC0003DMT400064093 1275 pgsc_dm_v3.4
GATGTAGCGTTACATGCAAAAAATAACCAGCAAGGATTAGGCTAGTTGGTACTAAGATAA
CGTTCTCACTGCATAAGTCTTTTTTCAGGTATATATCTATTGTTAGAGAAGAAGGGCTGG
AGATATCACAGCCAGGACTTGATGCTAGTAAATCGGAAGTACATCATCATATTACTGTGC
GCAGAGGGAGATCCAAGGTGCACAGGAGGTTCTACAGATTAAATAGAGGTGGCCGAACAT
GTGATAATAACAGCACAGAACCTCCTTGTGTGGGGTGGGTAGAAATGATGGCTCCGGTAT
TCTCAAAAGCCGCTTGGCGTTGTGCTTGGTATATGGTCCAGAACGACCTGATCCATGCAT
GGGGATTGGATATGAAGCTTGGTTATTGTGCGCAGGCAAATCTAAACAACTTTCTTCCTA
CTTCCCATCTCTTCTTGACATGATTATAACACGTGTTATTAGTTCTCAGGGCGATCGTAC
CAAGAAAGTTGGCGTGGTTGATGCAGAGTACATAACTCATTTGGCTGTCCCTTCTCTGGG
TGGTAATTCAGATGTAGAAACGGTGATCAAAGAATTAGATAATAATTCACTGCAAGGGAA
GAACTTGTCTGATTCTGATACATTGGCTGCTCCAGTTGAGAAATTTGACAATCGGTCTCT
GGTTAGGAGACAATCGTATATCGAAATGAAGGTTTTTCGAGAGAGATGGCGTAAAGCCAT
CAAGCAAGATCAATGTTGGGTTGATCCATTTCAAAGTCAAGAAAAAAGAAAAACAGGCAC
ATAATGAAATTTCTCATAAGTTATATACATTCAGTTGTTTGTATATACATTGTATACAAA
GAGCAGCTAAGAGTAAATAGCCATACAAGACTGATATCTATATGCATCAAGAGCCACAGT
TACTCAGAAGAGAGAGGGGTGGTGTGTGGATGTGGAAAATTCAGTCATCTTTCTTTTTTT
CCCTTTGGGAATCATTTTTATAGATAAATTTTGTGGTATTTGTAAATACCATTTTTTTTC
TTCTTTTCCTTTTTTTTTTGGGGGTCTAAGAATAATGCCAAGGGTGCTGTATAGTTATGT
TTATTTATGGCATTCAATTTGGTGATTTGTTTCAGGTCAACAATAAGATTTATTGCTCAT
AATTACTGCCTCTTGGCACACTTGCATTGTATCTTGCTATTTTGCCGTCAGATTATTCTT
GCAATCCTCTTTGAAAACAGTGAGGATTTATCGAAAACAATCTCTTTAACCCAAAGGTAG
AAAGGTTTGCGTTCA
