Microarray Probes on PGSC0003DMT400064090
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_19670_PI426222305 |
JHI_St_60k_v1 |
GCAAGATCAATGTTGGGTTGATCCATTTCAAAGTCAAGAAAAAAGAAAAACAGGCACATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400064090
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400064090 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G18530.1 |
+1 |
8e-122 |
362 |
199/416 (48%) |
Protein of unknown function (DUF707) | chr4:10217749-10220285 FORWARD LENGTH=389 |
Transcript Sequence (1173 bp)
>PGSC0003DMT400064090 1173 pgsc_dm_v3.4
ATGGTTAATGCTGGTTCTGAGGTTTCTGTGCCTGATGCTAAAAGCAGATCATGTATCTGC
AGCCTCTTCTTGACTCTTGCTTTAATTTGTGCGGTCTACTTTACCGGAAGTGCTTTGATG
GCTAAGGATTTCAGGGCTTTTTCAGGTTTTACAATGAACAGTACAAAGCAGAATGGACAA
TGCGGAAAATGCAAGAAAAAGTGCAGGCCATTAGGGAGTGAGGCACTCCCAGAAGGAATT
ATTTCTAAAACATCAAACCTGGAAATGCGACCATTGTGGGGTGATGTTGAGAAGAAGTCT
CCACATTCAGTTAACTTATTGGGAATTGCAGTTGGAATAAAGCAAAAAGAGATGGTGAAC
AAAATTGTTAAAAAGTTTCTTGAACATGACTTTGTTGTGATGCTTTTCCACTATGACGGT
GTGGTGGATGAGTGGAATGATCTTGAGTGGAGTAATCGTGCCATACATGTATCTGCTATG
AACCAAACAAAATGGTGGTTCGCGAAAAGGTTTCTGCACCCGGATATAGTTTCTGAATAC
GACTATATTTTCTTGTGGGATGAGGACCTTGGAGTCGAAAACTTTCATCCGGAAAAGTAT
ATATCTATTGTTAGAGAAGAAGGGCTGGAGATATCACAGCCAGGACTTGATGCTAGTAAA
TCGGAAGTACATCATCATATTACTGTGCGCAGAGGGAGATCCAAGGTGCACAGGAGGTTC
TACAGATTAAATAGAGGTGGCCGAACATGTGATAATAACAGCACAGAACCTCCTTGTGTG
GGTTCTCAGGGCGATCGTACCAAGAAAGTTGGCGTGGTTGATGCAGAGTACATAACTCAT
TTGGCTGTCCCTTCTCTGGGTGGTAATTCAGATGTAGAAACGGCAAGTAGTTCTTCCCTT
GATCAATCATTGATCATCGATCCTCTTTTTGCAATTTTGATCTACTTTTATTACTTGGGA
GCAAATGGATTAAGTGTTTGGCTTGTCTTGTTGAATCTCCTTTCGGAATTGCAGGCTGCT
CCAGTTGAGAAATTTGACAATCGGTCTCTGGTTAGGAGACAATCGTATATCGAAATGAAG
GTTTTTCGAGAGAGATGGCGTAAAGCCATCAAGCAAGATCAATGTTGGGTTGATCCATTT
CAAAGTCAAGAAAAAAGAAAAACAGGCACATAA
