Microarray Probes on PGSC0003DMT400063921
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_31162_PI426222305 |
JHI_St_60k_v1 |
GGACTTGTGAAAGGAGAAAGCAATGTTGCTTCAACATGTCCTTTTATGAAATAAGAAGAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400063921
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400063921 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G78780.2 |
+1 |
4e-69 |
217 |
104/210 (50%) |
pathogenesis-related family protein | chr1:29621447-29622431 REVERSE LENGTH=238 |
Transcript Sequence (859 bp)
>PGSC0003DMT400063921 859 pgsc_dm_v3.4
AAATTAATCAAAATGGCAAGTTCAATAGTAGGAGGGGGAAATAAATTCAGAGATTACTTG
AGTGATGAAGAGCTCAAAAACACCAAATGGAGAAATGGTCCTCCTAGTTATGATGTTGTT
GATAAGCTCTTTGAACAAGAAAGAACTAATGTATGGGCTGAAGGATCAGTTGAAGAGGAA
GTGCAAAGGCTATTGAAGACTTGGGAAATGGAAATAGTCCATAAGGCAGATCCAAATGAG
CTCAAAACTATGGATCCAAACAAGTTTACAATTAGTATCAATGGCCGAAAGGGCTTGACA
CCAGCAGAATCTGCAAAGCTTGGTGGTAGCTACAATATATTCCTACAAACTTCATTACCA
GAAAATGTTCGACTCTACAATCCTGACGATGAAACATTTGAATCATCACAAAATCTTTTC
AGATCGATATTTTTACGAGGATTCGCGATCGAAATCCTCCATGTTTATTCAGGACCACCA
GGAATTGTTTACAGATTTAGGCATTGGGGTTACATGGATGGTCCATTTAAAGGACATGCT
CCAACTGGACAACTTATTGAGCTCTTTGGAATTGGCACATTTGAATTGGATAAAGAGAGT
AACAAGATTATAAAGGCAGAGATGTTTTTTGATAGAGGAGAATTGCTTGGAGGACTTGTG
AAAGGAGAAAGCAATGTTGCTTCAACATGTCCTTTTATGAAATAAGAAGAAATTATTACT
AGCAAAATGTTGCTTATTTACAAGATGTATGTGGTTATGTTTTATTATTTTACTAAAAAT
GTGTAGCTTACCTTTGAAGCACATGGTTTGTTTAATATTTCACATAAAAAGTACTCATGT
TCTATGATTTTTTTTTCTC
