Microarray Probes on PGSC0003DMT400063852
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_31143_PI426222305 |
JHI_St_60k_v1 |
CCTAATTGGAAGGAGTAATCCTCATTATCTCAAGTGTGTACTTGTAATAACTTAGACATC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400063852
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400063852 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G21460.1 |
+2 |
1e-111 |
329 |
161/236 (68%) |
Nodulin MtN3 family protein | chr1:7512030-7513281 REVERSE LENGTH=247 |
Transcript Sequence (1091 bp)
>PGSC0003DMT400063852 1091 pgsc_dm_v3.4
AAAAAAACACAAATATATCTCTTCCCTATAATCCTAACATATTTTTTCTACATATACACT
ACCGTTTCCCTTCTCAACACAATATCTTTCTTGAATAGAAAATTAAAAACTTCTAGCTAT
GGCAATCATCAAAATTCTCCACACTTTGTTTGGGATTTTTGGCAATATTACTGGCTTGTT
TCTCTTCTTAGCTCCAATGATAACATTCAAGAGGGTTATTATGCATAAGTCAACAGAGCA
ATTCTCAGGCATACCATATGTAATGACACTTCTCAATTGCTTGCTCTCTACTTGGTATGG
TCTGCCATTTGTGTCACCAAACAACATGTTGGTATCAATTATCAATGGCACAGGAGCAGG
ACTTGAGGCATTCTATGTGTTAGTTTTCCTCATATTTGCACCAAAGAAGGAAAAAGCAAA
AATCTCTGGAATTCTATGTGTTGTCCTTTCTATCTTCTCAACTGTTGCATTGGTCTCAAT
GTTAGCTCTCCATGGCAATAAAAGAAAGGTCTTTAGTGGCTTTGCTGCTGCTATTTTCTC
CATCATTATGTATGGTTCTCCTTTGTCAATTATGAGGCTAGTGATCAAGACTAAAAGTGT
GGAGTACATGCCTTTCTTCTTGTCCTTGTTTGTTTTTCTTTGTGGCACCTCATGGTTTGT
CTATGGATTGCTTGGAAAAGACCCTTTCATTGCAGTACCAAATGGAGTTGGAAGTTTTCT
AGGAACAGCACAATTGATATTGTATGCCATTTATAGGGAAAACAAAGGACAAATCAAGAA
AGGTGAGGAAGATGGAAGAGTAGAGATGGAATTAGAGAAGCCATATGAGAAGGAAATACC
TAACACCCAAAGTGGTGATGCAAAAGTATGATGAATTTAATTAGAATATTCAATCAAAAA
AAAAAATATGTAACCAAACTTTGTGTTATTTTTTTTTTCCTAATTGGAAGGAGTAATCCT
CATTATCTCAAGTGTGTACTTGTAATAACTTAGACATCATTAGTATTCTCCTTGTTTATT
GTGAAAGTTCTTTTAAGAAATCAAGAGTCTTTTTCAAACAATTTTCTTTTTGAATTTCAG
ATTTATTATCA
