Microarray Probes on PGSC0003DMT400063776
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_12536_PI426222305 |
JHI_St_60k_v1 |
GCCCCATTGTACATTTTCTGTCATTACACTTCGTGGTATATAAACATATAGCTGTACATT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400063776
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400063776 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G18750.1 |
+1 |
2e-85 |
289 |
177/440 (40%) |
Calmodulin-binding protein | chr2:8125827-8128363 FORWARD LENGTH=622 |
Transcript Sequence (2709 bp)
>PGSC0003DMT400063776 2709 pgsc_dm_v3.4
CGGCAGTTCCACAAAGTTTGGGTTGATTAGATCCTCTATATTCTTGTAACTAAACTTTCC
TCGTATTTTTCTAAGTTCACGCGGTAGGTAATTCATCGTTGCCTACTAATTCTGGTTATT
TTCTTGGATTTTTCTTCTTCAAATCTTGAAAGCCCCCATTTTTCCAAGTTGTGGATTTGA
TTAATCAGTAAAAGCAACAATATTTTATTCAAGATTCTCTTCTTTTAATGCAGAAGACGA
CATTGACTTAAACAAGTAAGTCTTTCAGTTTGAATTTTGAATAATAAACACAACCACACA
TAGCACCCACAATGTGTTTGTGTTAATGTCTAAGAGAACTACACACCCTTTGTGTTTGAC
AATATAAATTAATTGGATATATATGAAGCTTCTTACCTGTTTCCTGCTAATTTTGGGGTC
ATTATTTCTAATATAAGACTATAGTTGTTAGCAGTTGAACGTTACCTTCTAACATATTGT
GCAGGACTATTGGTATCACTCCCAAATTGGACTTTGATGGTACAGAAACGGAATATCAAT
CAGGATAATGATGAAAACTCTGAGTTTCCATCTAGGGAATCTAAGCGCCAACATCCTTCT
AATGCGTTTTTTTCAGGGTTAAGGAGTTACTCTTCTCCACAAGAACTTGCACTAAGGTTG
GAGCCCTCAATCCGAAGCTGGGTGCGTGAAGAGATTGAGAGAACACTTCAATCTACCCTG
AGATCCTCACTTAATGATGACAAGACTTCTCAATCTAGGGCTATTCAGTTACTTTTTGAC
GATATTCTCCCTTCTTCCCTTTTCACGGGCAGTAATGTATCCAGGGACAATAGGCCCATT
AAAGTTCTCTTGCATGATGCTAGTTCGAACCAGAGAATAACATCTGGACCGTTATCTTCG
GCAAAAGTTGATGTGGTTGTTCTTAATGGGGAATTTAACCCCAACGATCTAGAAGACTGG
AGTGAGGAAGAGTTCAGCAAAAAGGTTATTCGTGCAAGAGAAGGAAAACGTCCATTATTA
ACTGGAGATTTAATCATTCAGCTAAGGGATGGTGTGGGATATCTGGGTGATATCAGCTTC
ACTGACAATTCAAGCTGGGTAAAGAGCAGGACCTTTAGGTTGGGACTGAAATTGATTAAC
CGCTCTGGTGAATTTAGGGTCAGAGAAGGAGTTAGCAAGCCTTTTACTGTGAGAGATCAT
CGTGGGGAGGCTTATAAGAAGCATTACCCTCCCACTTTGGATGATGAGATCTGGCGGTTG
GAAAAGATTGCCAAAGATGGTGCTTCACACAAACGGTTGAGTAATGAAGGAATATCATGT
GTGAAAGAGTTCCTACGGCTGTTTGTCACTGACCCATCTCTTTTACGTAAGATGCTGGCT
TGTGGGAACAACATATGGGAGAAAATAACTGAACATGTGAGCACTTGTCCGTTAGACAAC
AGCGAGTGGTACATCTACAACGCCGGAGAAAGTATTGTACTTCTGTTCAACTGCATCTAT
GAACTTGTAGGTGCAATTCTTGATGGACAAAATTTCCAGTCCATTGACAAATTAGATGTA
TTTCAGAAGCGGATGGTGGAAGACTTTAAGCGTAGTGTTTATAAAAATTTGAATTGTCTA
GCTCCCCTTGAGGACCGTTCTTTGATTGGCCAAGCAGCCCTTACATCCAATCTGCAAAAT
GGCCTTTCTCATATTCCTAGTTCAAGCCAACAGAATATGAACTACTCAGATGAGCAAGGT
CAAGTGGAGTTCCAGAGCAACTCTGATCATGCCACAATTTCATCACCGCTAGCCTACACA
GCTCAACAGGATAGTCCAACTGCAGTGTCCATGCCTGAAAGCTTTCATGGAATGCAAGCA
TTTAATTCGACCTTGGCAAACAGTTTCTTGGTTGGTGATCCCTGCTCCAGTATCTACCCT
GGTGATTATGATTGGGGTTCCAATGGTTCATTTGATTCACTAGGGATGAGCGATTATCTA
CCTCCCAACAACAATTATCAGTTTGAGACACCAGTGTGGCAAGGGAATGGATTGTTAGCG
AGTTCAAGTGTTCAGCCGGTGTCACCTAATATTGGCATTCACATCACAAGACGTGGAAAT
CCTAGAGCCATTTGGTGCACAATCCGTGCTGTCCTGAAATGGAAAACATTGGTTAAGCGA
AAGTAGCTATTTGAAGGTGGAAAGGCTTTTACAAGTAGATATCTGAAGTTTGTTCGAGAT
ATAACCAGGAAACTTCACCTCCATCTCTCAGCCTATTCTTTGAACTCTTGGGTATTTTGA
AACATAAATATATTTATATGTCCATTACATATAGCATCCATCGTATATATGTGAGTAAAT
TGTACATATAGTAAGGTTTTTGTCAGGATGAAGGTGCATGTAGGATAAATTTTCTTGCAG
AAACAGTAGCAAGATATCAAATGTTATGCTACCGCAAATGCCATCGTCCTTGGAGGAGTT
TAGTGCTACCTCTTTACTAATAGTACTAGTAGTTTTCTTGTGTGTTTTCTGCATCAGATG
TAATAAATGGTGCTTGTACAGGAAGTAATATTATTACCTTAATTATTAGTTTATAATAAT
GAGATGCTATGTCAATTGTTGTCAGCTGTATCCTTGGAGCTCGTCTGGCCCCATTGTACA
TTTTCTGTCATTACACTTCGTGGTATATAAACATATAGCTGTACATTACCTAATTGTTGG
GAATCTTAG
