Microarray Probes on PGSC0003DMT400063769
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_12374_PI426222305 |
JHI_St_60k_v1 |
CTATCAAGCTAATGCTGTCGCCTTCACCACAACGGCATCAAGATAGTGAGTAATAATTAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400063769
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400063769 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G29060.1 |
+3 |
3e-174 |
523 |
289/647 (45%) |
GRAS family transcription factor | chr2:12481991-12484075 FORWARD LENGTH=694 |
Transcript Sequence (2526 bp)
>PGSC0003DMT400063769 2526 pgsc_dm_v3.4
CAACTTCAATACTACTTCTTCTTCTATTCTACTATTACTTACTACTTCAACAGCATTTTC
TTCTATATATCAGGTACCATTCTCAGTTCCTATTTTTTGTTTCAGTTTCTTTTCTTTCTT
TTTTGTTAGAATTTCTGTGATTCTTGATTTCTTCAATCAAACATCTCAGAATTTAGTAGC
TCAAACCAATTTCCATGGAAGCCCTTTTTCAAGAACAGCTTTTTCCTTGTGCTGATTCTT
TCATTTTTAGGCACCCTTCAATTCCAATGGATCCAAGAAAAGATGTTGTACAAAATGGTG
TCAATAATCATCCTAGTTTTGTTCAAGATTACCTTTCAAATCATGTTGTTGGAGAGGGAG
ATTCTTCTTCTCCTAAAGAGGAAGGGGAAAGGGACTATTCTGATGCAATGTACAAATTCT
TAAGTCAGATGCTTATGGAAGAAGATGATTTGGAGAATAAGCCATGTATGTTTCATGACT
GCATGGCTCTCCAAGCTAAAGAGAAATACTTATCTGATGTACTTCATGGATCCGAAAACA
ACTATTCCCCACAATCTGTCATTATCAATCCACACGAATCCTCTAGTTTTCTCAGCAACT
ATTCACCTGATTCTATTGAGTCGCCTCAATGGGATCTTAATTTCGAATCCCCTGTTTCCG
TGTCGACTTTATCTAATCATGACTCTTTCTTCACTTCCTTCGGAAATGGCCATTTTGAAG
GAGGAGCTGTTAATGTGTTCCGAAGTGGCAGCAGCAGCAATTCACCCACTGGTTTGAGGG
AAAAGAAAAATCGACATCGAGGAGATGTTGCTGCAGACCTTGCTGCAGACCAGCAGAGGA
GTAACAAACAGATGGCTACATTTGTTCATGATGAATCTGAACCATTGGAAATGTATGACA
ACGTGTTGCTTTGTTTAAACAATCCATATGTGGAACATCATAGTGCTACTAGTGTCACTT
CCTACTCGCCGCCAAATGAAGCCAAAAAAGCAAGCAAAGTTGGAAGGCCGAGAGGTGGTA
GGAAGCATAGCAGCATTGTCAAGAAGGAAATGGTGGATTTGAGGGCTCTGTTGACTCAAT
GTGCTCAGGCCATGGCAAGCTATGATAGCAGAACAGCTAATGAGCTGCTGATGCGGATAA
GAGAACACTCTACACCTCATGGCGATGGGACGGAGAGGTTGGCTCATTATCTTGCCAATG
CCCTTGAAGCACGCCTGTCCGGCACAGGAACAGCTTTGTATACAGCGTACGCACCCAGTA
GGATATCAGCTGCTAACATTTTGAAAGCTTACAAGGCATTTATCACAGCATGTCCATTCA
AGTTGCTGTCAAACATGTTCGCAAACAAGTATATCAGAAAGGTCATTGCTGGAGCACCAA
AGATCCACATAATTGATTTTGGGATTTTGTATGGTTTCCAATGGCCCTGTCTCATACAAG
GTCTATCCATGAGGGCTGGGGGACCTCCAGAGCTTCGCATTACTGGAATTGATCTTCCCC
AGTCAGGTTTCAAGCCAGCAGGGAGGGTTGAGGAGACAGGGCGTCGCCTGGAGAAGTACT
GCAAGCGATTTAATGTCCCTTTCGTATTCAAAGCCATCGCGAAGAAGTGGGAAAGCATCA
CGCTTGAAGATCTTGAGATTCAAAGGGATGAAGTGTTGGTAGTTAACAGTTTGTATAGGC
TAGGAAACATACCTGATGAGACAGTAGTACCAAACAGTCCAAGGGATGCTGTCCTGAATT
TAATCAGGAGAATCCGTCCTGATTTGTTCATCCATGGTGCGTTGAACGGTACTTTCAACA
CTCCATTTTTCGTCACACGATTCAGGGAGGCGCTTTTTCACTTCTCCTCACTGTTCGATA
TGTTTGAGGCTACTATGCCCCACGAGGATGAGGACAGAAAGCTATTCGAGGAAGAGGTTT
ATGCAAGAGATGCTATGAACGTGATAGCTTGTGAAGGGACAGAGAGAGTCGAGAGACCTG
AAACATACAAGCAATGGCAACTTAGATGCGTTAGAGCTGGATTCAAGCAGGTGCCACTTG
ACCAGGAGATTGTGAAGATAGTGAGGAATAAAGTGAGGTCGGAGTACCATAGGGACTTCT
CAGTTGATGAAGATGGACACTGGATGCTGCAAGGATGGAAAGGACGCGTAATTTACGCTC
TCTCTTGTTGGAAGCCTACTAAGCAGTCTGTAAAATTAGGAGTCTAGTTTATCAGGCCAT
TTCTTCTATGGCTGTATTTTCATATGCTAGTGGAGTTTGTAGCAGCAGCATTTTGGAATT
TATTCTAATTTAGTTTCACTCTCTCAAATGCTTCAAAAATTTATTTCACTTGACGTGCAG
AAGCATTACAGATTTGTGAGCTTCAAATGGCCGGAAGCCTTCTTTGAAGCATAAATTCAA
ATAGCTTACGTGCATTTGGATTTTGGATTAAACAAATTGGTATTTCACTATATACGGCAC
AGATCACTATCAAGCTAATGCTGTCGCCTTCACCACAACGGCATCAAGATAGTGAGTAAT
AATTAT
