Microarray Probes on PGSC0003DMT400063747
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_12337_PI426222305 |
JHI_St_60k_v1 |
CCTCAGTCCCAAACAAGTTGGAATCGAGTATATGAATAGTTATTGACAATATTTCTCCAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400063747
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400063747 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G27930.1 |
+2 |
0.0 |
535 |
257/375 (69%) |
Protein phosphatase 2C family protein | chr5:9958199-9960219 REVERSE LENGTH=373 |
Transcript Sequence (1633 bp)
>PGSC0003DMT400063747 1633 pgsc_dm_v3.4
CGTGTATGTTAGTAATGTCACTGTACAAAAATAAAACCAAACTCTGTTTGTCTCCTTTTC
TCTTTCCTTTTAAAGGATCATAAACCAACGTAATCTTTTAATGGATTCTCTTCTTTTCTC
TCGATTTCTCAGCTTACCCACTTCGAATTTCGTCATTTTCCGGCAATCTTTTTTTTGATT
TTCCGACCTGTCAATAACTCTCCGGCCAATTCTCCGACCATATTCAACCGCAAAGTTAAA
CCAAAGGAGGGTATTTGGGTAGTTAAATTAAAGAAAGGTTGAAATGGGGCATTTTTCTTC
AATGTTTAATGGATTAGCAAGGTCTTTTTCCTTGAAGAAAAGAAAGAATAGTTCTGGAAA
TGGGAAATATGATGGTAGAGATGCTGTTGAAGCTATGGCTAAAGAAGCCAAGAGAAATGA
CTTGATATTAAGGTCTTCAGGGACTGTAAATGTTGATGGTTCTAAGAATTTTGCTTCATT
ATTCTCAAGGAGGGGTGAAAAAGGCGTAAATCAAGATTGCTTCATTGTTTGGGAGGAATT
TGGTTGCCAACATGACATGGCATTCTGTGGTATATTTGATGGGCATGGTCCTTGGGGTCA
TTTTGTGTCAAAGCAGGTTCGGGAATCGATAGTATCATCGTTGCTTTGCATTTGGCAGGA
GAGTCTAGCTGAGGCTTCAGCTGATCCAGATTTGGATAAAAAGGATCAAAGGTTTAACAT
ATGGAAAGAGTCCTTCTTAAAGGCATGTGCAACTGTGGATCAGGAGCTGGAACACCATCC
CAAAATTGATACATTTTACAGTGGAACCACTGCTTTGACAATAGTCAGACAGGGTGAGGT
TTTATTTGTAGCAAATGTTGGCGACTCACGTGCAGTATTAGCTACCACTTGCGATGATGG
CAACTTGGTACCAGTTCAGCTCACTGTTGATTTCAAGCCTAATCTACCTCAGGAAACTGA
GAGAATACTGCAATGTAATGGTAGAGTATTTTGCTTAGATGATGAATCTGGGGTGCACCG
ATTATGGCTGCCCGATGAATCCTCCCCTGGATTGGCAATGTCTAGAGCCTTCGGGGACTA
TTGCGTGAAAGATTTTGGTCTAATTTCAGTGCCTGACGTGACTCAAAGGCATATCACAAG
CAAAGACCAATTTGTTGTGCTGGCAACAGATGGGGTATGGGATGTTATATCGAATGAAGA
GGCTGTAGAAATTGTATCTGAAACTCCAGATAGGGCAAAAGCAGCCAAGCATCTTGTTCA
ATGTGCTGTTCGTGCTTGGAAACGTAAGAGGAGAGGGATAGCTGTAGATGATATTTCAGC
AATTGTACTCTTCTTTCATTCTAAGCATTTCTGTCAGCATATTTACCCTGTAACTACTCC
AAAATAACACTTGATAGAAAACGCAAGTTTCTGTCTCTCGTGTTCTCCATCTACCTGCCT
TTGGTTAGTTTATTTTTTTTCATAGTTTATTCACGAAATGGATTGGTATTAGTCTAGAAC
TCTAGATACAACAAAAAATCATTCTATTAGATCAAACAAGTCTTAGAACTAGGTGCTCTT
TAAGTAAACCTCAGTCCCAAACAAGTTGGAATCGAGTATATGAATAGTTATTGACAATAT
TTCTCCATTAGAG
