Microarray Probes on PGSC0003DMT400063742
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_12497_PI426222305 |
JHI_St_60k_v1 |
GAAGAATTGTCCCTTTTATATGGGGAAGAACCAGATCATTGGACTTGGAAATCTGTGCCA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400063742
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400063742 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G09155.1 |
+1 |
2e-60 |
198 |
127/278 (46%) |
phloem protein 2-B15 | chr1:2949831-2950842 REVERSE LENGTH=289 |
Transcript Sequence (1041 bp)
>PGSC0003DMT400063742 1041 pgsc_dm_v3.4
AAATAATCTCACTCTAATTTCAACAAAAATTAGCCCAAATCAACAAAAAGGCAAACAATT
AGTTCACCTAAGATAATGGATGTATTCAATGAATTACCAGAAGATTGCATTTCTTCAATT
CTTTCTCTTACTTCACCTAAGGATACAATTAGTTTCTCTCTGGTTTCATCCTTTCTCCGA
TTAGTGGCAGCATCTGATTTTGTCTGGCAAACATTATTGCCTTCTGATTGTGATAAAATT
ATTGACAAATCTGTCATTCCATTGAATTATTCTTCTAAAAAAGAGCTTTTTATTCGTCTC
TGCAATTCAATTCTCATTGACGGTGGTAACAAGAGCTTTGCGATAGAGAAATCTAGTGGG
AAAAAATCATATATAATCTCAGCTGAAGAATTGTCCCTTTTATATGGGGAAGAACCAGAT
CATTGGACTTGGAAATCTGTGCCAGAATCAAGGTTCTCAAAAGTGGCTGAGCTGAAAGTG
ATATGCAAATTAGTAGTAAAAGCAAAGCTAAGAACAAGTATGCTTTCTGCAAACACGAAT
TATGGAATTTATTTCATAATGAAAATCTCAGATCGTGCATTTGGTCTGAGTTCAGTGCCG
GTTGAGACTAGTGTGGAAATCGGCAATCGGAAAGATGTTCACACGGCGACTCTGGATCAC
CGGAACGGCGAAAAAGATCTGCCGGATGAAAAACAGAGGTATGAAAGAGTGCCGTATAAA
AGGGAAGATGGATGGATGGAAATTGAATTAGGAGAATTATTCAATGGTGGAGATGAAGAT
GAAGATGAGGAATTTACAGTGAGTTTAAAGGAGGTGAAGGGATTCCATGTAAAAGGTGGA
CTTGTCATTGAAGGCATTGAAGTTAGGCCTAAACACTAAGACTAAGGAAAATTCAAATAT
TGTTGTCATAAATTTCATTCTGTCACTTAATGATTTATTTATTTGGTTCGTGTAAAAGTT
GGTGAGAAAACCAAAAAAAAAGAGAAAAAAAATAATTGATAATGAAATATTACAATATAC
TGGTTTTCTTTGAGGGGTGAC
