Microarray Probes on PGSC0003DMT400063717
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_12377_PI426222305 |
JHI_St_60k_v1 |
GCCGAAGCTCTTAATCCGAGCTCGCTATTTTTTGTTCTTTTCTTTTGGTGTGTTTTCTAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400063717
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400063717 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G15920.1 |
+3 |
6e-64 |
210 |
108/214 (50%) |
Nodulin MtN3 family protein | chr4:9030742-9033343 REVERSE LENGTH=241 |
Transcript Sequence (1437 bp)
>PGSC0003DMT400063717 1437 pgsc_dm_v3.4
ACTTCTTTTAGTTCTCAAATTAATGGTTCATTTTAAATTTAAATTATGTATTCGCCTCAG
ACCGCTTTGGGTAAATATAGCCAGAAGTACCAAACTACAGAGGGTAACGTGTCCTGTTCT
TGTAACATTGAATATCGCTCGCTCATTATATATTTGACCTTTTGGATACCAACTTTCTGG
GCTTTGCTACTACTATTTATTGTTTACATCTACAGAGTACTTGTTTCTTTCTCTCGACTC
TATTTCTCATCCACTACTTTTTCTTTTTCCTTCACGTAACTCTTACTGCTATAATTGTTA
CCTTTCTACTTTCATCTCTTTTGTTTTTTGTTTTCCACCTTAATTCTACTTCCTTCATGG
CTAACTTTAGCTTCATCCTTGGCATAATTGGGAATGTCATCTCCATACTTATGTTCGCTG
CTCCAATAAAAACATTCAAAAGGATAATGAAGAAGAAATCAACAGAGGATTTTAAAGGGA
TACCATATATCACAACACTATTGAGCACATGTTTGTGGACATTTTATGGGTTACTCAAAC
CTGGAGGTTTGCTAGTGGTCACAGTCAATGGTACTGGTGCCATATTCCACATCATATATG
TCACTCTCTTTCTCATTTATGCTCCCAAACCTCTTAAGATTCAATCAATGAAATTGGTGG
CAATAATAAATATAGCATTTCTTGGGGCTGTAATAGCAATCACTTTACTAGCTGTGCACG
GAACCACTCGACTCACATTAGTCGGATTTTTATGCGCTGCTTTGAATATTGGCATGTATG
CAGCTCCTCTAGCAGCTACGAGGACAGTGATAAAGATGAAGAGTGTGGAATACATGCCAT
TTTTCCTTTCCTTCTTCCAGTTCCTTAATGGAGGGGTATGGACTGCTTATGCAGTTCTTG
TCAAAGATTATTTTATTGGAGTGCCAAATGGGATAGGCTTCATATTGGGTGCGGCCCAAT
TAATCCTGTACTTCATGTACTACAAGTCAAGCCCAACAGAAGAAAAAGGCTCGGCCCATC
TAATGAAAAGAGAAATTCAAATGAAAGATGTTAATGGAGCCCATGAAAATGAGAACAATA
GAAATCTTCTTCACAAAGGGAAAAGTCTTCCCAAGCCATCATTAGTTCGTCAATATAGTG
AAAGACTAGTAAAGACTCTCTCAAATACCCCATCTTCTTTGGGCTCACACAATGTAAATG
ATATTGAAAAAGGCCTCAAAGAAGCACACTAAATTTCTAATTTTATTCACCCAACTTTTT
TCTTTCTTCTTATTGGGCCTTTATATGTTGTAATGATAGCCGAAGCTCTTAATCCGAGCT
CGCTATTTTTTGTTCTTTTCTTTTGGTGTGTTTTCTAAATACACTATGAAATTTATGTAA
GTTATACTAATATAAATAATAAAATTTAATGTCCAGTTCAATGACTGACAATTTTAT
