Microarray Probes on PGSC0003DMT400063172
Probe ID | Chip | Probe Sequence |
---|
CUST_12938_PI426222305 |
JHI_St_60k_v1 |
CTGTTTTGTACAGACCAGAAATATGTGCCTTACTGTACCTGTTTTATGCCTTTACAAATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400063172
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400063172 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G19000.1 |
+2 |
2e-48 |
169 |
135/287 (47%) |
Homeodomain-like superfamily protein | chr1:6561335-6562684 REVERSE LENGTH=285 |
Transcript Sequence (1352 bp)
>PGSC0003DMT400063172 1352 pgsc_dm_v3.4
CTTATCTCCATTCACCACACGCCTCTCTTAGCTCCCCTCCCTAAGCCATCTTGTCTTCTA
TATATATACATAAATTATCTCTATATGCATAGTCTTCTCCATTTAGCTCGAATAAATTCC
TGATTCTGCGAGAATGATGATGATGTCGAGTTGCTGTTCACAGTCGGGAAACGACGGCCA
CAACTCTTTCACGTGCGCCGGCGATGTGTCTGTCGGCGGCGGCGTAGGAGGAGGAGAGAT
CATGCTGTTTGGCGTGAGGATGAAGGTAGACCCTATGAGGAAGAGCGTGAGTTTGAACAA
TCTGTCTCAGTATGAGCAGCCTAATTCTAATGATAATAATAATAGCAACAGCGGAAATAA
CAATGACTCTTCTAAAGTTGCCGCCGACGAGGGTTATGCTTCTGCCGACGACGCTGTTCC
TCACCACTCCGGCAGTGGCCGTGAGCGTAAGCGAGGAATTCCATGGACGGAGGAAGAGCA
CAAGCTATTCCTTTTGGGATTGCAGAAAGTGGGAAAAGGAGACTGGAGAGGAATCTCTAG
AAACTTCGTCAAAACTCGCACACCGACACAGGTCGCAAGTCATGCTCAGAAATACTTCCT
CCGGCGAACTAACCTCAATCGCCGGCGCCGCCGTTCTAGCCTCTTCGATATCACTACCGA
CTCGGTATCTGTACTACCGACAGAAGAAACGAAAAACCGGCAACAACACTCCATTCCATC
ATTGCGTCATGTAGAATCATCCAAAATGAATGCATTTCAGGTGACATCTATGCCAGTAAA
TTTTGGGCCTGTTATGTTGCCAGCAGAAATTGAGAAGCCAATCCTTAGGCAAGGAAGTCA
AAGTTATTATTATAATGGATCATCATCGATATTCCTCCGGCCGGCTCCTGTTGTTGTTCC
AATCTCTAATTCATCAAGAATAGCTGACTTTAACTTGAATCAAAGCTCAGCAATGGAGAC
ATCTTCGTTATCGTTGACATTGTCCTTGTCATCACCATCATCATCGTCTACTAGGCACTC
AGGATTCCAAGTGATGTCTAGTTTTAATAATGGAGAGAGCATCATCAGTGTGGCGTGACA
TACCAGAATCTCTATTATTAAATTAAAATAACAGTAGTAACTAAAACATAGAAAAGGCAA
ATGGGAGTTCTATTATTAGTGGAGTAATATGTATGGTCCTTCTGTTTTGTACAGACCAGA
AATATGTGCCTTACTGTACCTGTTTTATGCCTTTACAAATATTATGTTAGTGTCTTCTTT
ATTTGTTTTGTAGTTGGAGATAAAAATTAACAATGAATAATATTGGACTTTGTGCTTCTT
TCTTGTTGCTAGTTGAGTAAAATATCAATGGA