Microarray Probes on PGSC0003DMT400063116
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_12796_PI426222305 |
JHI_St_60k_v1 |
CCCCGCTTTTCTACCTCAAGTAAGCAATTTATGCTTGTTTCAAATTAGAGTTTAACTTCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400063116
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400063116 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G00050.1 |
+3 |
7e-31 |
124 |
112/274 (41%) |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr4:17863-19848 FORWARD LENGTH=399 |
Transcript Sequence (1796 bp)
>PGSC0003DMT400063116 1796 pgsc_dm_v3.4
CACATGTTGTGTGTTTCAGTATATAATTAGTCATCTGAATGCGACAATGCAAAAAGGGGA
CCAGAAAGCAATAAGAATAATTAATTTTTAGTATATAAAACAGAGAATAAGCAGAGTTCA
ACATTTGGGAACAGAGAAAAGGAATAGATTACTCAATAATCATATTAATCATCATGAGTC
ATTGTACGGTACCAACTTGGAATCCAAGGTATCAAAGACAAGAACATGTCGTAGAAGCCG
GAGAAGCTAACAAATATCCTCATGTTCATAACCAGCAGATTCAAATTAATCATCTTTTGC
CCATGTCTAGTAAGTGTGAAGAAGTTGCAGAGTTGACATGGGAAAAGGGGCAGTTAGGAA
TACATGGACTAGGGGGAATCCTTTCCATTTCACAAGCAAAACAGACACTGGGAAGAACCG
GTGACACATTAGAGTCCATCGTGCATCAAGCCACACACCACGCGAAGAATCAGACTTCAA
TACATCAAAATTATGACCAAAATGAAGATCAATATCTGAAAACTGGGGTGCTGTATAGTG
GAGGAAAATGGGGCGAGAGTTCACAACAAATGGCGCCTCCTCAAGCAACAGTGTTGGCAA
AAAAGAGGATGAGACCATCAGAATCTGACCCTCAATATGGTGGAGCTGAAGATCATGAGT
ATGCAGAAGGTAGCGCGTGTGCAAGTGCCAGCGCTACCTTCTATAGGGAGAATGATACCA
CCATGGTTACATGGCCTTCCTTTGACGAGTCTTCGCGTAGCATGAAGTCTAAAACCACTT
GTGATGAGGATTCTGCTTGTCATGTTGGTGGCTCGGAAAACAAGGAGGAAGAACATGAAA
CAAAAAGGTCCAACTCATCAAGACGCAGCCGAGCAGCAGCTGTTCATAACCAGTCAGAGC
GGAGACGTCGAGATAGAATTAACCAAAGGATGAAAGCTCTACAGAGATTGGTACCAAATG
CAAGTAAGACAGATAAAGCATCAATGCTTGATGAAGTGATAGATTACTTAAAGCAGCTAC
AAGCACAAGTTCAATTAATGAGCAGTACTCCAAGAAACATGACACCACAAATGATGATGC
CTCTTGGAATGCATCAACATATTCAAATGTCATTACTAGCAAGAATGGGCGTGGGCGTTG
GTCTTGGCATGGGCATGGGAATGTTTGACATGACTGCTTTAGCTCGCGCTGCTGCTGCTG
CTGCCTCTGCCACAACTCATCCAAATCAAATGACTACTGCTCCCTTCAATATTCCATTCA
CCCCACCAGGAGCCTTCGCGCTGCCTGCAACCCCGGCTAATTCTGTTAGCCCTGCCACCA
CCAGTACTACCACCAATTCCACCCCTTTTACTAACCCCGCTTTTCTACCTCAAGTAAGCA
ATTTATGCTTGTTTCAAATTAGAGTTTAACTTCTATACACTATTACGTCAATTAAAACGT
ATAGAGTAAAAAATAAGACAGACAATCTGTTACAACACGTTTAGTGTAAAAAATCTTTTC
TTTACATGTTAATTTACTAGTACTATACTTTTGTTTTTTGTTACAACGACGAACAGTCGA
TGGACATGGAGTTCTTCAACAACATGGCAGCTTTGTATCGGCAGCAATTAGCTAATCAAT
CTACACAGATAATAGGCAGCAAGTTGAACCAGGGAGACCAGACAGAATAGAAACTGAGTC
TTTTTTTAAAAAAAAATTTCTATAATTTGTACTTATATTGTTTCTATATATATATATATA
TATATATCCAAGAATTGCAAGGTTTTAGACATTAGATAAAAATATGTATATATTGT
