Microarray Probes on PGSC0003DMT400063064
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_12858_PI426222305 |
JHI_St_60k_v1 |
GTTCACTGTTTTTCTACTGAAGCAAAAGTTGGATTTCCTAGATTTTCTTATCGCTGACTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400063064
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400063064 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G39040.1 |
+2 |
5e-23 |
63 |
36/69 (52%) |
transporter associated with antigen processing protein 2 | chr5:15625660-15629621 FORWARD LENGTH=644 |
Transcript Sequence (841 bp)
>PGSC0003DMT400063064 841 pgsc_dm_v3.4
TCAATGCTACACGACAAATTATACAAAGACACAAATATAAAACTCACCACCCATTTCATC
ATTCACTCCCACACTTTCTTCCATTTTTGAAAAGCTCTACCTGTGACCACCACACTTCCA
TTCTCAATCCATGGACGGCCATTCAGGAATGCATGGCCATGGTTTCGGTAATGCCAGAAC
TCCTTTGTTAGACAGACATGCCTTAGGGAGAAAGAGAAATGATGCTGGAGATGATCAGCT
GGGAGACCTTGAGCATGGTGATTCTGTTCCGGCACCAAATGTTGGATTTGGCAGAGTTAT
TTCACTTGCAAAGCCTGAAGCAGGAAATTTGGTACTGGCGACAATTGCTTTGCTGTTTGC
AGCAACATCAAGCATTTTGATTGTCGGTACCTCTTTTTCAGTTCACTGTTTTTCTACTGA
AGCAAAAGTTGGATTTCCTAGATTTTCTTATCGCTGACTTTATAATGCTCAATTTTGCAG
CCAAAATTTGGGGGAAAGATAATTGATATTGTTTCAGATGATATCCAAACACCTGAACAG
AAATCAGAAGCTTTAAATGCAGTCAAGAACACAATACTTGAAATCTTTCTGATTGTCATT
GTTGGGTATTCCCTGCAACTTTTGGCCAACTTTCTTTTTCTATCTTTTCATGCTCTGCTA
AAGCAAATCTTCAATTTAATTATTGGTAACCTGAATCGTTGCTTGGAGTTTGTATTCTAC
TAATCTAGGCTTTCACGGTGAAGGGGGCACAATGAGACACTTGGCCCCTCCACAATGGGT
TTCCCCTTCAATTGCATTTTGTAATGTTTAACTTTGCAACAATAATTGTACTAAATCGAC
C
