Microarray Probes on PGSC0003DMT400062961
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_12980_PI426222305 |
JHI_St_60k_v1 |
CTGTTTTCCAACTACATGGTGATCTTGATACGCTTTGCAGGTTGGATGAGGCTATTGAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400062961
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400062961 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G27500.1 |
+2 |
0.0 |
696 |
379/608 (62%) |
Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:9551629-9553654 REVERSE LENGTH=650 |
Transcript Sequence (3258 bp)
>PGSC0003DMT400062961 3258 pgsc_dm_v3.4
ATTTTCACTAGTCAACTTGTGTTCTCTGTTCCATTTATTTTAGATGTTTTGTCTTTGTAC
ATACTTGATTCTTGCTGTAGCTGTATGCTAAGATCTGTTGAAAAGATTCAATTTCTATGT
CCATGTAAAGGTCAACTTGTTTGTGGCATATGATGGGGGTATTGTTGGATCTGCTTTGGG
ATTGACCTAGAAAATACTTTGAATTTGCAGGTAATTTTATTTAATTTATTGGTGGTTCTT
GTTTATTTTTGTGTGTTTTTGCTGGAAGATGCCTGGAGTTGTTATGGATGAAATTCATGA
AGTAGGCGAGATTAAAGAATTGAAGGAAAATGGAAATTCTACATCATGTAAAGAGAATGA
GGAAGGGGGTTTAGCTCCTCGAAATGGGGGCGAGGAGCATGTAGGTGATGGGGTGGTTGA
GCCTTCCATTGAGGAACTTTATGAGAATGTGTGTGAGATGCAGAGCTCTGATCAATCTCC
ATCTAGGCATAGTTTTGGATCAGATGGAGATGAATCTAGGATTGACTCCGAGTTACGACA
TCTTGTGGGGGGAGAAATGAGGGAAGTGGAGATAATTGAGGAGGATGAGGAGGTGCAGAA
GCCAGAGACTGAAGACTCTCGTAGCGATTCTGGCTCTAAGAAGGAAACTTCTGATGATGT
GAAGTTGGATAATTCACCATCGTCTAGTATGAAGGATCCTTCTTCAGGGCAACCCAAGAC
GCCCTCTCAATTGGTGTTGGAATCAGAAACTTCAGCAAAATCAAATACAAAGGGTAGGAG
AGCTTCCCTTGATAAGAAAAATGGAAATAATACGAAGAAGGTAGTTGTGGGAGGTATCTC
AAGGAGTAGGCAGAAGAGTTCGCCTGCTTCAGGATCAAAATTGAAGAATGGAACTGAGGA
CTCATCTGATTCAGGTTTAGACAATCCTGACCTTGGCCCTTTCCTGCTTAAGCAAGCAAG
AGATTTGATAGCTTCGGGGGATAATTCCCATAAAGCTCTTGAATTGGCTCATCGAGCAGC
GAAGTCATTTGAGAAATGTGCCAATGGAAAACCTAGTTTGGATGTGGTCATGTGTCTGCA
TGTAACTGCAGCAATATACTGTAATCTGGGCCAGTATGATGATGCCATTCCACTGATAGA
GCACTCGTTAGAAATTCCGGTGGTTGAAGAAGGACAAGAACACGCCCTTGCCAAATTTGC
TGGTTATATGCAATTGGGTGATACTTATGCAATGTTGGGCCAACTTGAGAACTCGATTGT
TTCTTATACCACCGGTATGGAAATCCAAAGACAAGTGTTGGGAGATAGTGATCCCAGAGT
TGGTGAGACTTGTCGATATCTTGCTGAGGCTCATGTTCAGGCTCTGCAGTTTGATGAAGC
GGAGAAGCTTTGTCGGATGGCTCTTGACATACATAAAGAGAATGGTTCACCACCTTCACT
AGAGGAAGCGGCAGACAGGAGGCTGATGGGACTAATTTGTGAGTCAAAGGGAGACCATGA
GGCTGCTCTCGAGCATCTTGTTCTGGCCAGTATGGCCATGGTAGCCAATGGGCAGGAATC
TGAGGTGGCATCTGTTGATTGTAGCATTGGAGACACATATTTGTCTCTGAATAGGTATGA
TGAAGCCATTTTCGCTTACCAAAAGGCACTCACAGCTCTCAAGTCTAGCAAAGGAGAAAA
CCATCCCGCCGTTGCTTCTGTTTTTGTCCGTTTGGCTGACTTGTACAACAGGACGGGAAA
GCTAAGGGACTCAAAGTCATACTGTGAGAATGCCCTCAGAATATATGGGAAGCCCATACC
TGGGATTGCTCCAGAGGAGATTGCTAATGGTCTTACTGATGTTTCTGCTATTTATGAGTC
GATGAATGAGCTTGATCAGGCACTCAAGCTGCTACAGAAAGCGCTGAAGATTTATAACAA
TGCTCCTGGGCAGCAGAGTACTATAGCGGGTATCGAAGCCCAAATGGGGGTGATCTATTA
TATGTTAGGAAAATATTCTGAATCTTATAACTCCTTTAAAAGTGCCATTTCAAAGCTCAG
AGCAAGTGGAGAGAAGAAATCAGCATTCTTCGGGGTCGCCCTTAACCAAATGGGGCTTGC
TTGTGTACAGCGGTATGCAATAAATGAGGCAGTCGAGTTGTTTGAAGAATCAAAGGGCAT
CTTGGAGCAAGAATATGGACCTTATCACCCTGAGACGTTGGGAGTGTACAGCAACCTTGC
TGGCACATATGATGCTGTTGGCAGGTATGTCAATCGCTACATCTACTAACTTTGCAATTC
CTTTAAAGAAGCACCATATTTACTTTGTCATTTACCTGGTGTGATTTGTTATGTTCTTAG
AGAGCTTAAACATTTTACTTAGTTTGTTTTATTATCTGAAATTCATATGATTTTTTCTGC
TGTTTTACGATTTTGCATGCTAGACTTGGTGGGGGCAGTTTTCTTCTTGTACTCTCTGCT
TTCTGATGAAATCCCACCTTTAAGACATTGATCTAATTTGAGACTTGTTACTTGCATAGT
TGAAAAGTGAGCATATATAAGACAGCTCCCTCCCCAAAAAAGTACTAAAATTTGTCAAAG
TTTTCGCCAACCAAGTTTTGTTTGACTAGGAGCTAGTATCTGCTAAGAAGTATTTATTGG
CAGGCAACACATATGTGTGTCCGTCGTTATGAATCATGATTCTGTAATGCATGTCTGTTT
TCCAACTACATGGTGATCTTGATACGCTTTGCAGGTTGGATGAGGCTATTGAAATATTGG
AATACATTGTTGGGGTGAGAGAGGAAAAGCTAGGGACAGCAAATCCAGACGTAGCTGACG
AAAAGAAAAGGTTGGCTGAGCTACTAAAAGAAGCTGGTAGGGTTCGAAATAGAAAAGCCA
GATCACTGGAGAATCTACTCGATGCTAATCACCGTCCTAATACTATAAATAATGATTTGA
TTATAGTATGATTATGAACACAATGTACATGAAAAATTAAATATTTTGAGATATTTATCA
GAGTCAAGAAAAAGGTATAGGTTGAAGGCTTTATTAATTGAATCTTATTCTGGCATGAAT
TGGCATAATGCTGAATGGGGGCATCTTGGTCACAAAGTTGTTGTATTGGTCTTGCTTTGT
TTTCATATTCATTGATATATTTATTGTGCCCAGTTGTTGCAACTCTGTAATCATTTGTAT
ATCATTATAGAAGGAAAGAATAATACTTTTTATACACCATTACAGATTTTGAGCATTTTA
ATGAGCTGTCCTTGAGAG
