Microarray Probes on PGSC0003DMT400062907
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_12955_PI426222305 |
JHI_St_60k_v1 |
GTGGCTTTTTATCAGGGGAAGTCTACTTTCCTTGGCTCATAAACTAAGAAAATTCAATTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400062907
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400062907 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G10200.1 |
+2 |
4e-90 |
272 |
122/174 (70%) |
GATA type zinc finger transcription factor family protein | chr1:3346677-3347763 REVERSE LENGTH=190 |
Transcript Sequence (1092 bp)
>PGSC0003DMT400062907 1092 pgsc_dm_v3.4
AATGTGGACAGCCAATATTTGAAAAGGCTTGTCCGCTGCTACTACTTCAACACGCCCGCA
CTTGTTCTCTGACCTCTAAATTACCCAAATTTTCAACTTCGAAGACTTAATTAGAGACTG
TTTGCATCTCTTTATTCTTTATTGAATCGATCGATTGATCTTTCTGCAGAGAAAAAAAGG
AATGGCAACTTTTGGAGGGACAACACAGAAGTGTAAGGCCTGTGAGAAAACTGTCTACTT
GGTGGATCAACTTAAGGCTGACAGCAGGGTATATCACAAGTCTTGTTTCAGATGTAATCA
TTGCAAGGGTACTCTTAAGCTAGGTAACTACAATTCCTATGAAGGAGTTTTATACTGCAG
ACCTCACTTTGATCAACTATTCAAAATGACTGGAAGCCTGAACAAGAGTTTTGAAGGGGG
TCCAAGAACAGTCAAGGAAAGATCTCTTGATAAGGCACAAGCAGCCAACAAAGTTTCAGC
TTTGTTTGGTGGAACACAAGACAAATGTGTTGCGTGCAAGAAAACTGTCTACCCCCTGGA
AAAGGTGGCTGTTGATGGCACTTCATACCACAGGCCTTGTTTCAAATGTAGCCATGGGGG
TTGTATAATCAGTCCATCGAATTATGTGGCCCATGATCACAAACTCTACTGCAGGCACCA
TCATACGCAACTCTTCAAGCAGCGAGGTAACTTCAGCCACATGGAAGATCATGAGAAGAT
TAAAGGGGTGACTGAAAATGGAAAAGCATGAGGTCCTTCCATAAAAGCTTTCATTTTCGT
GTGATTTTGCTATACAACAACATCGAGAGTCGGCTTTCTGGCCTGAATCAGGTGCAGAGG
TCAAACATATATATACAAGAGGGGTTATTTACAATGCCTATATGTGATATTTTCATGAGA
GAGTCAACAAAGTTTTACTTCATTTTTCTTTTTATCTTGGTGTGTGTTTTACTTGATAAA
TCAAATAGTTTTGCCTAAAGTTTGTATAATGTGATTGCTCTTGTGGTTGTCTGGAAATTG
GAGTGGCTTTTTATCAGGGGAAGTCTACTTTCCTTGGCTCATAAACTAAGAAAATTCAAT
TTTTTCAGTTTC
