Microarray Probes on PGSC0003DMT400062881
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_12916_PI426222305 |
JHI_St_60k_v1 |
CAGCAACCTTTGCTGCATTACTTATTTTGTGCATGTGCATATTTCCAATTTTATCTTGTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400062881
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400062881 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G62570.2 |
+3 |
4e-152 |
454 |
256/527 (49%) |
Calmodulin binding protein-like | chr5:25114934-25116967 FORWARD LENGTH=494 |
Transcript Sequence (2047 bp)
>PGSC0003DMT400062881 2047 pgsc_dm_v3.4
TTTCAATCTAAAAAATGTCGATGAAACGGCAATCGCAAGACGATTCCAAGTCTAGACTCG
ATGCAGGTTCTTCTGAGGATAAACGTCGCCGGAGTTTGCCTTCTCTCAGCAGTGTGATTA
CAGAAGTAATGAATATGAGTAAAGTGCAACATTTTATGGAGCCAGTTTTGGAGCCACTTA
TTCGTAAAGTGGTAAAAGAGGAAGTTGAATTGGCTCTCAGGAAATACATGACCACCATTA
AGCGGAATTGTGGGAAAGATGTATTTGCTTGTGAACTTCGAAGCCTGAAACTGAAGTTTT
TAGATCTCATCTCTCCCCCAGTATTTACTGGAACTCGCATAGAAGGAGAGGAATCTAGTT
TGAAAGTAGCCCTGGTTGATGTTCTTACTGGGGAAGTTGTCTGTAGTGGTCCTGAATCCT
GTGCAAAAGTTGAAATAGTAGTACTCGAAGGAGATTTTGACGGTGATGATGGGGACAATT
GGACTGCAGATGAATTTAAGAACAACATTGTGAGAGAAAGGGAAGGAAAGAAACCTCTCC
TTACTGGGGATGCATTTTTGTATCTTAAGGAGGGCATTGGCTGGTTGAGTGATATTTCAT
TTACTGATAACTCAAGCTGGACAAGAAGTCGTAAATTCAGGCTGGGTGCTAGGATTGTTG
ATAGCTTTGAAGGGATCAGTGTACGAGAGGCGAAGACAGAATCCTTCATTGTCAGGGATC
ACCGAGGAGAGTTGTACAAGAAGCACCATCCCCCTTCTCTTTCAGATGAGGTATGGAGGC
TGGAAAAGATTGGCAAAGATGGAGCTTTTCACAGACGTTTGAGCAAGGAAAGAGTCAATA
CCGTGAAAGATTTTCTGACTCTACTCTATCTAGATCCTACAAGGCTTCGGAATGTTCTTG
GGACAGGTATGTCCACCAAAATGTGGGAAGTCACGGTTGAACATGCTCGAACTTGCTTAC
TTGACAAGAAAGTGTACTTATACTACACATCTGTATCTGGTCCAAAAACCGGTGTTGTTT
TTAACATTGTTGGACAAGTGATGGGGCTTTTTCCAGACTGCCAGTTTGTTTCTGCTGAGA
AATTGTCTGAAACTCAAAAGGATGATGCTCGTAATTTGGTGATTTGTGCATTCAGACACT
GGGAAGAAGTAGTCTCTTTTGAGGACGAGTCCTCTCTTATGGATTGGGTTATGCAAATTT
CCACTGTTCAGTTCCCCTCGAACTCACCCATGGTGGGCAACTCTGATACCAGTGACGATG
TTTTAGCTTCCCAGAAGGTTAGCAGAAGTGAATATCAGCCACTAAGTGCGTCAACGCCTG
ATATCATGCCATCTTTCTGTTCTATTGCTGGTTTCAGCAGCTTGGATGACTATGTCTTGC
ATGGTATAGACAACATGGATGTTGCGTTTGACCAACCATTAAATTTCCCCGGGCAAGACA
CCAACTCCTTGATGGCTGATGCTGATTCTATAACTCCCCCATCATTTTGTGATGATGATC
ATCTGCCTTTCTTTGATACCGACTATTCCCTTCCCAGTTCAAGCTTTGCTCCATCACCGG
ATCTACAATGTGCTGTCAACAGCTTTCTTGCTCATAGTAGTTCAATTGTTCCTCTGGATA
AAGCTCAAAGGAGATGGAAGATGCTATTTAGTGTTCTCAGATGGTTCTCTGTAAGGAGAA
TCGTGAACAAAAGAACCATCATATCTTGAAGAGTGATCTTCTCCTTATGCTGAGGTAAAC
GAATCTGTAGGCAATTCCTGCCCGATGCAAAATTGTGTGCAGTAGTAGAGTCGGTAGAAT
TTTCTTTAGATATATGTAAAATTGTTCAGTTAGCACCAATCATGCTTTCCAGTTTTCATT
TTTTTAATCAAAATTTGAGTCTTGTGAATGGTATACAGTCCTTGGTGCCTATCTGATGAA
AAGTTTGTACATATTAGGTCGATGTGTGTAGGTACAGCAGCAACCTTTGCTGCATTACTT
ATTTTGTGCATGTGCATATTTCCAATTTTATCTTGTGTTGAATTTCGAATGCTTACCATT
ATAACAC
