Microarray Probes on PGSC0003DMT400062862
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_13059_PI426222305 |
JHI_St_60k_v1 |
CTAAAGCTGTTTGCATGATGCACATGGTCAAGATTTGCCAGTTAACATATCTGTATATTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400062862
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400062862 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G50120.1 |
+2 |
3e-125 |
375 |
197/365 (54%) |
Transducin/WD40 repeat-like superfamily protein | chr5:20382630-20383796 REVERSE LENGTH=388 |
Transcript Sequence (1507 bp)
>PGSC0003DMT400062862 1507 pgsc_dm_v3.4
TTTTAATTTCTCTACTCCTCACTCCTCACAAAGACAGAGACACCAAAAAATGCATAATAT
ATGATCCTCTCATAAAAACATAGTCATATACTAGAGTTCAGGGGAATGAAGAATGATGCC
TTTTTACCAAACTTCATGTTCAAGAAATAGCTCAAAAGTAGATTCACAGCCAAGTTTTCG
TTCAGTTCCTTCAATCAAGTCACTATGTCATGATCAGAGTTTTTCGCATAATCTTGAAAC
TCAACATCAATGCATAGCTAATCTTAAGGGACAGAATTCCTATACATCTTCCCTTGTACT
TGGTGGGAAATACCTTTTTACTGGCTCTTCTGATAAAGAAATTTGTATGTGGGAGCAAAA
AGCTCTAACTTCCACAATAGATGCTGGAATAATCGACACGGTTATAGCAGGGAAAGGTGC
TGTGAAGTCTCTAGTAATTTTGGCTGATAAGGTCTTTAGTGCTCATCAAGATCACAAAAT
CAGAGTCTGGAGAATCGAAAACCATGATACGGATACTCCTAAAATAGTTCATTTGGCCAC
TCTACCTTTACTTAGTGACAGAGCCTTTAAATTTATGGTACCAAAAAACCATGTTCAGAT
CAGGCGCCACAAGAAGTCCACATGGGTGCACCATGTTGACACAGTGTCAGCACTAGCCCT
TTCCAACGACGAGTCATTCCTCTACTCTGTTTCATGGGATCGAACACTTAAAATCTGGCG
AACCAGTGATTTTAAGTGCCTGGAATCAATAGCAAATGCACATGATGACGCGATCAACAC
ACTAGAAATATCACAAGAAGGGGATGTTTTCACTGGATCAGCTGACAAGAAAATTAAGAT
GTGGAGAAAGGAAGAGAAAAAACATTTACTAGTTTGTACACTAGAGAAACACAGATCAGG
TGTAAATGCACTAGCAGTTGGGAGAAGTAGTACTAGTACTGATTCTGTTTTATATTCGGG
TGCTTGTGATAGGTCGATACTAGTATGGGAGAAGGATGAAAGTGGTGACATGGTGCTGGT
GGGTGCACTCAGGGGTCATAAAAAGTCCATACTGTGTCTAGCTGTTGTCGCAGATTTGGT
GTGCAGTGGTTCAGCAGATAAAACAGTAAGAGTGTGGAGAGGGGTTGAGAGATGCTACTC
TTGTCTTAGTGTTATTTCAGGGCACAGTGGACCAGTGAAATGCCTGACTGTGACTAGTGA
TCAACAAATTCCATCTGATACAACTTCTTCATATATCCTATACACTGCTAGTTTGGATGG
TGAAACTATGGTTTGGAAGATTTATGTTCCTTTTCTCTAAAGCTGTTTGCATGATGCACA
TGGTCAAGATTTGCCAGTTAACATATCTGTATATTATATTTTGCATTATAGATTGTTGGG
CAAGTGATCCAGAGAAGAAAATATCTGCAAAATTTCAACTTTTTTCTTCTTTAGTTGGAT
TGTATTGCAGGTTTATTCTATTGAAAAAGGCTACCATTATGAAATGATTATGCTTCTTAA
ACTGGAA
