Microarray Probes on PGSC0003DMT400062844
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_13015_PI426222305 |
JHI_St_60k_v1 |
CAGTAGAATTGTCTGTATTATCGTTGTATGATCAATGTCGTCTAACTCAAGTGTACTTGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400062844
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400062844 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G62610.1 |
+1 |
2e-79 |
253 |
153/300 (51%) |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr5:25133117-25134600 REVERSE LENGTH=281 |
Transcript Sequence (1546 bp)
>PGSC0003DMT400062844 1546 pgsc_dm_v3.4
ATTTAATTTAATTTGATTTCAACACTAATCATAAATGTTAGTGTGAAAGTGAAGTTAAAT
TTTTTGCTAAATATTAAAAAGAGTGAGTGATATTAATTGCCAGAGGGAGTACTAAAGTGC
GCCTGGGGTTACAGTGCGCATCCTGATCTTCATCTTCTTCCCTCTCTACCTCACATCACA
GTAGTCTCTGTCTCTCTCTCTATGGCTTTCACTTTCACTCTCACTCTCACTCCATAATAA
TAAATAAACCCAAACATTTTCAAACCATACTCACTTTACACTTCTCTATTCCCTCCATAA
TCACTTAGGTTTTTTTTTTTTTCCATTTCACTCATTTAGTGTTAAATAAAATTCACACTA
ATCCTTCTTATTTATGGTTTATATATAATTGTGAATTGTTCAAAAATGGATCCACCTATT
ATTAACGAAGGTTCATTCTCGGCGGCGAATCCTTCTTCTTACACCTTGGCTGAGATTTGG
CCGTTTGCCGCAGCGGCAAATGGTGGAGGAAACGGTGAACTTGGTGGAGGAGGACTGGGA
CTCAGAATGAGTAGCTTTACGGGTTTATTAGAAGCGGCTGCGAACTCCATTAATGAATCT
ACTCTGACGGAGCAGAGTGGAAGAAGCGGCGGAGGTGGAGGAGCTGGTGGTGGTGGTGGT
GGAGGTAATGTTGGTGTAAGGAAGAGGGATATGAATTCGGAGGATGATTTTTCTAAGTTT
GTCTCTACTAGTGATGCTAATGATTTGGATGGTTCAGTGGCCAAACGTTTGAAAGCATCC
CAATCTAAAGAAGAAAATGGTGCTTCAAAGGTAGAAGCAGAATCAAGTTCCCATACGGCT
AACAAGGGGACTGAACAAAGTAGTAAACCTGAGCCACCTAAGGATTACATCCACGTAAGG
GCAAGAAGGGGTCAAGCTACTGATAGCCACAGTCTAGCAGAGAGGGCCAGGAGAGAAAAG
ATCAGCGAGAGGATGAAAATTCTGCAAGATTTGGTTCCTGGATGTAATAAGGTTATCGGA
AAAGCACTTGTTCTTGACGAAATAATAAATTATATCCAGTCACTACAGCGTCAAGTTGAG
TTCTTGTCCATGAAGCTTGAAGCAGTCAATTCAAGGATGAACCACCCTATAGAAACCTAT
CCTTCGAAAGATCTAGCACCATCAGCTTTTGATACCACTGGAATGATTTTCGGCACTCAA
GCACCGAGAGAATATGCTCAAGGGGCACAATCCGAGTGGCTCCATATGCAGGTTGGCAAC
AGCTTTGACAGAGCAACATGACAGATACCCTAATGAATTGGAACATAGATTATTCAGGAA
CATCATGATGTCTTTTAGAGAACCTTGGTATTGGATCCAGCAGCACTATAGAAGAACCAT
TCTTAAATGTGTAAATCATAATCATTTCCAGTAGAATTGTCTGTATTATCGTTGTATGAT
CAATGTCGTCTAACTCAAGTGTACTTGTAATATGTTTGTATTGATATAAGAAATAGACTA
AGCAAACTTTCTCAGAATATAATCTTGCTCAAAGAACAGAAATTTC
