Microarray Probes on PGSC0003DMT400062826
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_52647_PI426222305 |
JHI_St_60k_v1 |
TTTGCAAATACAGAGAGGCTGAATTGGGGTCAATGGGGAATCTGCATTGGATTTGCAGCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400062826
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400062826 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G22910.1 |
+1 |
0.0 |
577 |
285/349 (82%) |
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein | chr3:8116335-8119388 REVERSE LENGTH=1017 |
Transcript Sequence (1050 bp)
>PGSC0003DMT400062826 1050 pgsc_dm_v3.4
ATGATCACTGGAGACAATGTGTTCACTGCAAAAGCCATAGCAACAGAATGTGGAATTCTT
CATCCTAATCAGGAAGTAGATGAAGGGGCAGTCATAGAAGGTGAAGAATTTCGCAACCTA
ACAGATGAAGTACGGATGGAGAGAGTGGAGAAGATATGCGTGATGGCAAGATCATCCCCT
TTTGACAAACTTCTAATGGTGCAGTGCTTGAGAAAGAAAGGTCATGTGGTCGCGGTCACA
GGTGATGGAACGAACGATGCACCAGCTTTAAAGGAAGCAGATATAGGACTTTCCATGGGG
ATTCAGGGCACTGAAGTAGCTAAAGAGAGTTCTGATATTGTCATCTTGGATGATAACTTT
GCTTCAGTTGCCACAGTTTTGAAATGGGGAAGGTGTGTCTATAACAACATCCAGAAATTC
ATCCAATTTCAGCTCACAGTAAACGTGGCTGCGCTCGTGATCAATTTTGTAGCAGCTGTT
TCATCTGGTGAGGTACCACTCACAGCAGTACAGTTGCTATGGGTAAATTTGATCATGGAC
ACATTAGGGGCATTAGCACTTGCGACAGAGAAGCCAACCGAGGAACTCATGAAGAAGAAA
CCAGTCGGTAGGACTGCACCGCTTATCACCAACATTATGTGGAGAAATCTAATGGCTCAG
GCCTTATATCAGATTGCTGTTTTACTGACCTTACAATTCAGAGGAGAATCAATCTTTGGT
GTCAGCAAGAGAGTAAACGATACGTTGATCTTCAACACGTTTGTTCTTTGCCAAGTGTTC
AATGAATTCAACGCGCGAAACATGGAGGAGAAGAATGTTTTTAAGGGAATATATAAGAAC
AAGCTGTTCATGGCAATCATCGGAATAACATTGGTTCTCCAAGTGGTGATGGTGGAGTTT
CTAAAGAAGTTTGCAAATACAGAGAGGCTGAATTGGGGTCAATGGGGAATCTGCATTGGA
TTTGCAGCTGCATCTTGGCCAATTGGTTGGCTTGTCAAGTGCATAAATGTCCCAGAGAGA
CCAATCTTCAGTTATCTCAGGTTAAAATAG
