Microarray Probes on PGSC0003DMT400062678
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_4875_PI426222305 |
JHI_St_60k_v1 |
AATTGCCTTTGGCCTTTCATCCCAGGTTGATCAAGTTGTTGACCCTGTTGAATTGCTCCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400062678
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400062678 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G01390.1 |
-1 |
4e-16 |
77 |
38/48 (79%) |
vacuolar membrane ATPase 10 | chr3:150265-150922 REVERSE LENGTH=110 |
Transcript Sequence (2349 bp)
>PGSC0003DMT400062678 2349 pgsc_dm_v3.4
ATTGCAGGGAATAATCCCAAGTTCAATAGCTATGACAATGTGTTGGGCATTTCTACTAAT
TGAAGCACTTGTGCTAGTTGAAATCAATGTGGGGTTACTCAAAAAGAACAAAGTGAAATT
TGAAGACGGTGAACTAGAGATCATTTCGATTAGAACAATGGCTGAAGAAACACTAGGAGA
ATGGGGTGGAGCCTTGGCTACAATAACCTACGTCTTCTTAGGATACACTTCAATGATTGC
TTACATTTCCAAGTCCGGTGAAATCCTCTGCCATTTGATCAATCTACCGGAATCAGTTTT
GGGCTTTTTCTTCACTTCCCTCTTCACAATTCTCATATCTGTAGGTGGGACAAAAGCCAC
TGATCAAGTCAATCAGTGGCTCACTGCTCTTATGATAGGTAGCTATGATTGAATGTTTTC
GTTTCAATTTGTTTAATGAAGGAAAAAGGGTCATCTGAATAAAAGTTCAAACAGGACTGC
TTGTGGCAATTGAGGTTCTAACCATTCTATATGGAGGGTGGTCAGGAGACGAAGTAAGCA
GTGATTGGGGAAAAGTTCCATCAACCATACCAGTATTAATATTCTCTTTAGTCTACCATG
ATCTAGCTCCTGGTGAACAAACACAAACAATTTTTTTACAAGTGTTTTCTCCTTATTTTT
TTTTCTCTCACCAATTTGTGATTGTTGTTGCAGTTCTGTGTGCTTACCTGGAAGGTGATC
TGAAACGAATAAGAGCTTCTGTGTTGATTGGTGGTCTGGTTCCCCTCCTAGCGTTGCTTG
TTTGGGATGCAATTGCCTTTGGCCTTTCATCCCAGGTTGATCAAGTTGTTGACCCTGTTG
AATTGCTCCTCAGGGTCAAATGGAGTGGAGTTTCATATATGGTACAGGCATTCTCTCTTC
TAGCTGTGGGGACATCTCTAATTGGTACTCTTCTAAGTTTCTCTGAGTTTCTCAAAGAGC
AACTCAATAACCTTAACCTGCAATCGCGTGTATCCACAAGATTAGATTTACAGGTAACAT
TTGGCTTCTTGGGTGTAAATTTAGTGTCTCTTGTCTAACTACTTTAATTTAAAACCTAGC
AGAGATCAACTTCTCAAATCCGTCTAAGAAAATGGTGGATAAGAAACAATTTAGGCTTCA
CAGCAACAGCAATTGCCATTGCTCCCCCTCTACTTTTGTCAACAGCAATTCCAGATGCAT
TTTCTGCTGCTACAGATATAGCAGGCGGTTACTGCATGACAATGCTATATGGCATTCTAC
CACCAGCAATGGCGTGGGCTATGCATAATAGCAAAGGAAAGGACAGTGAACCAAAAATAT
CAATAGCAAGACCTGCCCTTGTCACTGTAGGAATAGTTGCGTGTGGTATAGTTGCAGTAC
AAATTCTTCAAGACCTCTCTATGTTGCATTCTTGAAGTGTATCAGTCTGATGCTAGACAT
TGTACATATGTATTACAGAATAAAAAATCTTCTCAAGATCATGGTAAGAAAAAGCATATT
GAAACTGCAAATTTATCAACAGAAAGAAAGTCACACTCCTGTTTACAGCTGCATCACTTC
ATATAACACAATACATGCAGAGACAAGTTCATTACATAACTCCCCGGAATCTAGATACAT
ATAAGAAACTGACATGCTGCCTAGACGCTGAACCTTGGTTTCTGATCTTTCGTTTACAAA
ACATAGGTCGAAAGGAGCTCAAATGAGTTGCTTTATTCAACAGAGCAAGACAATAAATAA
TGATAACAAACATACGATACAAATGGTGAACATCCATCAGACTGATCAAGCACAAGAACC
ATGAATGGGAGGAGCATAATTCTGCAAAATGACATTAAGCGTGACCCACTACATCCACAG
AAGATTTTAGTTCTTCACTGTGGTTACGTGCCTCAGAAGCATTTGGACAACATCAGCAGA
GACTCTTGACGCTTCAGTCTTCAGGTGTTCGATCTTTTCATTAGTTTCAATCTCAAGACG
TTTGACATTAGCACCTGAGTCACCACTAGTCTGTAAATGAGAGAAATCAGGAACCATGCT
TAGTCAATTATAGAGAAAAGAAGTCAGACCCACAGCCCAAAACATCTCCTTTCTCCCACA
CCCCCACAAGGACAGAGAAATTGGAAAATCGATGCAGTTCTGAGTGAGTATATTGTTAGT
GTCGGTCATTGAGGATTAAATTTGGACTCATTTTTGTTATCACCACTTAGAAACATGCTA
GAGAAGAAAATAAATCATATTTAGGGATCTAAAGGGGCCGTTTGGTCGAAAGTATTAGAA
CAATAATGCATGCATTAGTTGTGTATTACTAGTACCTTGTTTGGTACACTTTTTCAACCT
ATGTATAAG
