Microarray Probes on PGSC0003DMT400062617
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_32882_PI426222305 |
JHI_St_60k_v1 |
CCAAAGATTCAGAAATCATATACACATGGCTAGTGTTGAAGCAAGACATCTCAATCTTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400062617
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400062617 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G12920.1 |
+3 |
2e-75 |
240 |
142/316 (45%) |
SBP (S-ribonuclease binding protein) family protein | chr3:4122127-4123323 REVERSE LENGTH=335 |
Transcript Sequence (1185 bp)
>PGSC0003DMT400062617 1185 pgsc_dm_v3.4
GGGCACTGCCCATTCTTCCCTCTCTACTTCCCCCAACTCCATTTGCATGCTCTCTCTCCT
CTCATCTCCTTCTTTAACAACCCATAAGCCAAAGATTCAGAAATCATATACACATGGCTA
GTGTTGAAGCAAGACATCTCAATCTTTTAAATCAACAAAGGAATTTGATAAATTCGAATG
GATTTGTATACAATACCCAGATGAGTTCAGGACTGTTGCCAATGCCGGAGAATTATTTGC
CGATTCAGATTCAGCCCAAGACGTCGGTGAATACTGAGAGTGGTCTTACCTTCAACCTGC
CCACAAATGATGTAGTCGCTCCAAGGAAACGTTCAAGAGATTCATTCACTCCTTCTTTCT
CTACCCCTCAGAAACCCTGCAACGGACTCTCTCAAATTCCATCGTTTGTCGGTGATGATG
TTTTGCCACTTGTTCAACAGTATCAGTTGGATATCAATTCCATCATTTCTCACCATACGA
AGAAAATAAGATTGGAATTAGAAGAGCAACAGAAATATCAATCGAGAATGCTGGTATCAG
CAATTAGCGAAAGAGTAATGAAGAAAATGAAGGAAAAAGACGAACAAATACAGAGAATAG
GAAAAATCAACTTAGTCCTACAAGAAAGAGTAAAAACTCTTTACATGGAAAATCAACTAT
GGAGAGACTTAGCACAAGCCAACGAAGCCACCGCCAATTCACTCCGCAGCAACTTAGAAC
AGGTCCTGGCACACGTTACCGAAGAACGCCTCTCCGCCGAGGAAGACGCCGAGTCATGCT
GCGGCAGCAACAACGAAGAGGATGATAAAGAAGAAGAAGTGCGCACGTTAGCGGGAGATG
CGCAGGATAAGAGAAACAGAATGTGCAGAAGGTGTGGAGAGAGGGAATCATGTGTATTGC
TGTTACCGTGCAGACACTTGTGTTTATGCACAGTTTGTGGGTCAAGTTTACAGGATGCTT
GCCCAGTGTGTAATTCGAATATGAATGCCACAGTTCATGTGAACATGTCTTCTTGATCCA
TCCATGGAAATCTTCAACAATCAAGATTAGACAAAATAGAGTTACAGGTTACTGTAAATT
CACTTTTGGTACTAGTAAATGAATTGTTCATTCTTTCTCTATACATATTCTTTCACTTCT
TCTTGAAATTTATTGTTCAAGACAATTCTTAAATATTTATTCAGG
