Microarray Probes on PGSC0003DMT400062500
Probe ID | Chip | Probe Sequence |
---|
CUST_47865_PI426222305 |
JHI_St_60k_v1 |
GGGAGAAAACTGGATTCCAGGATTGATCCTTTTATTCAAATCTCAACTATTTTGATCCTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400062500
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400062500 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT5G60680.1 |
+3 |
7e-36 |
128 |
91/170 (54%) |
Protein of unknown function, DUF584 | chr5:24386247-24386738 FORWARD LENGTH=163 |
Transcript Sequence (844 bp)
>PGSC0003DMT400062500 844 pgsc_dm_v3.4
CTCGCTCTTTGATAACATCAACACATACTGAGATTATAAGAAAGAGATATAAGAATACAA
AAAATACTACCTTCCAAATTTAAACAGAGAGCAACAATTTCACATTCATTCTATACATAC
ACACGTGTCTGTATGTATACACAGTAACCATTCTTTCAATTTCTTCCCATCCATCATCAA
TGGCAGCTTCAAGGAGCTATTTCGCCACGGCAAACTATCATTTCCTCTCCACCGAGCCAG
ACCTTGCGATGACTCCTGATTCGGTGTTCGAGTTCGACGAATCAGACGTGTGGAACTCAT
CGACGGTTTCTCAGTCGCCGGAGTTTCGTAAGAAATCTCCGAGCTCAAGGATCTCGAGGA
AGCAGCGCGAAACGAAGAGCTACCGAAAATGTTCCGGCGCGACGGCGACAGCGACAGCGA
CGACGACTGCGGCGTCGTTGCCGGTGAATGTACCGGACTGGTCGAAGATACTAAAGGATG
AGTACAGAGAGTACGGAAGGAGAGATAGTGATGATGATTTAGACGACGATGATTTGGATA
ATCGGATTCCGCCTCACGAGTTTTTGGCGAAGCAGTTAGAGAGGACACGGATTGCATCGT
TTTCCGTGCACGAAGGAGTTGGGCGGACTCTCAAAGGGAGAGATCTGAGTAGAGTCAGAA
ATGCTATATGGGAGAAAACTGGATTCCAGGATTGATCCTTTTATTCAAATCTCAACTATT
TTGATCCTTTTCTTTTTTTTACTTGACGGTCACTTTTTAAATATCAAGTCCATCACTGCT
TTGTGATTGTAAGTTTTTTTTTTTTTTTTTTTTGAAGTTTTGAGAGTAAATTAAGACAAA
AAAA