Microarray Probes on PGSC0003DMT400062174
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_33971_PI426222305 |
JHI_St_60k_v1 |
TTGACAGTAATTGGGTACCAACACCAAGCTGATGTAGATGCTGGAGGTGATGTATGTGGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400062174
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400062174 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G37170.1 |
+1 |
1e-160 |
456 |
236/286 (83%) |
plasma membrane intrinsic protein 2 | chr2:15613624-15614791 REVERSE LENGTH=285 |
Transcript Sequence (1111 bp)
>PGSC0003DMT400062174 1111 pgsc_dm_v3.4
TCCATTTGCACTCACTTCTCATCAAATCAAAACAATTTCTCTCTCTTTAGCAAAGGAAAG
ATGACTAAAGAAGTTGAATCAGTAACAGAAAGAGGAGAGTTTTCAGCAAAAGACTATACT
GACCCTCCACCAGCACCATTAGTAGACTTTGAAGAACTAACACAATGGTCATTTTACAGG
GCAATTATTGCTGAATTTATAGCCACTTTGTTGTTCCTTTATATTACTATTTTGACAGTA
ATTGGGTACCAACACCAAGCTGATGTAGATGCTGGAGGTGATGTATGTGGTGGAGTTGGT
ATTCTTGGTATTGCTTGGGCTTTTGGTGGCATGATTTTCATTCTTGTCTACTGCACCGCC
GGTATCTCTGGAGGACACATCAACCCAGCAGTGACATTTGGACTTTTTTTGGCAAGAAAA
GTATCACTAATCAGGGCAGTATTGTACATGGTAGCACAATGTTTGGGTGCTATTTGTGGT
GTTGGTTTTGTCAAGGCTTTCCAATCAGCTTACTACAATAGATATGGTGGTGGTGTTAAT
GTCATGGCTGCTGGTCATAACAAGGGTGTTGGATTAGGTGCTGAAATCATTGGTACCTTT
GTTTTGGTCTACACTGTCTTCTCTGCCACCGACCCCAAGAGAAACGCCAGAGACTCCCAC
GTACCCGTGTTGGCACCACTTCCAATTGGATTTGCTGTGTTCATGGTACATTTAGCCACT
ATCCCAATTACTGGAACTGGCATTAATCCAGCAAGGAGTTTTGGTGCTGCTGTTATTTAC
AATGGTGATAAGGCGTGGGACGAACACTGGATTTTCTGGGTTGGTCCATTTATTGGAGCG
TTCATCGCTGCCTTCTACCACCAGTTTGTCCTCCGTGCAGGCGCAATTAAAGCTCTAGGT
TCATTCAGGAGCAATGCCTGATTTCAAATTTCATCAATCCAATGAATAAGAAGAAGAAAA
AAATTTGTACATAATTAAGAAGAAGAAAAAAAAGTGTTTGTTTCTTTATCCTATGAATTC
CCCTTTCTCTTTTGTGTATTTGTTTTTTCATCTAATCTTGTTTGTATCTTTGAATTATTA
TTAAAGTTAATGTTGTCTTGCAAAGTTTAAG
