Microarray Probes on PGSC0003DMT400061873
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_8952_PI426222305 |
JHI_St_60k_v1 |
GGTAGGTGGCGAATGTATGAGTTGTGACATTTGAAATTGTTTTGGTTATCAAAAGATGAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400061873
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400061873 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G56550.1 |
+2 |
3e-13 |
67 |
36/69 (52%) |
oxidative stress 3 | chr5:22895847-22896502 REVERSE LENGTH=172 |
Transcript Sequence (1066 bp)
>PGSC0003DMT400061873 1066 pgsc_dm_v3.4
TTTTCCCCTTATCTTGTTTCACCTATTCATTCACATAGAAAGTACCAAAAGAGGAAAATT
GCATTATTTTTTTTCAAGAACTGTATGGTGGATTTTGTTTGTTTAGATTATGAATGTGAA
AATGAGATTAGTTTCTTTGGACCAACAAAACAACCATGGGATCATGGATGAGGAAAATCA
TGATTCTGATTCTTCTGATATTTTGAGTAATTTCTCTTCATCTGATTCGGAGTTGCTTGG
CGAAGAAGAAGAAGAAGGAGAAGGGGATTCTTCAGATCCGACTTCTCCGAATTCTTCTTC
TTCTGGTGATTCAATAAGTCATGATGAACACACAAAAGGAGCTTTGCAAAATATGTCCAC
TCTTCTTCAAGAACTTCCCTTCAAGAGAGGCTTGTCAAAACACTACAATGGGAAATCACA
ATCATTCACCTCTCTATCAAATGTGAGAAGCTTAGAGGACATGGCTAAGCCAGAAAATCC
ATACAACAAGAAGCTCAAATCATGCAAGAGTTATGGAGTTTTCTTAGAAGGTTTCAAATC
AAATAACCTGCATCCTCCTATTAGAAGCAATAGTTCTTCAAGACTAAGCTCAAAGAGAGG
CTCATGTTCATCATTAAGAGCAAAGAGAAATGGAAGCTTTCTTGGGAATAATAGTAGACC
TCCTGCTCCTCCACATAGATCAACTAGTTTTACAAATCAAACCCCTTTGTTTGCTTGATG
GTTCTTATCAAAAAATATTTAAAAGGATTTACTAAATGTATTTACTTTGTTGTTGTTACT
GTTTCTTTTTTCAGCTGGATGCTATGTGATGCTTTCTGTAGTACTTGTTATATTTATTTT
TTATGTTCTTTGATATGTGTTACCTGAGTCGGATAGAGGCATACTTCTGTCCTTACTTGA
TTCCATCATGTGGACTTCATTGAGTATGTTTATGTTGTTGTATTTTGTGTTCGAAGTTCC
ATACTTAAATTGGATCTTGCTTGTTTTATTTAAACGGTAGGTAGGTGGCGAATGTATGAG
TTGTGACATTTGAAATTGTTTTGGTTATCAAAAGATGATTTAATCT
