Microarray Probes on PGSC0003DMT400061679
Probe ID | Chip | Probe Sequence |
---|
CUST_4171_PI426222305 |
JHI_St_60k_v1 |
CAAATTGGTATGTCTAGACAATGGTGATCAAGACGGGTTACTTATAAGTACAAAATTCCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400061679
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400061679 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT2G46760.1 |
+1 |
0.0 |
676 |
352/576 (61%) |
D-arabinono-1,4-lactone oxidase family protein | chr2:19213028-19215166 REVERSE LENGTH=603 |
Transcript Sequence (2004 bp)
>PGSC0003DMT400061679 2004 pgsc_dm_v3.4
CAAAATTTTTAAAAAAATCCTTATATAAGTAGGTGTTAGTTGCGTATACACATCATTCAT
GTTCTTCTATAATTATTTCATCAATTCTCTGTACTAGCCATGAGTGACACAAAAATCATA
AAACTAAGTTTGATTTTCTTTATGATCTACTTAGTGAATTCTAGCCCACCTGAAGATCCC
ATAAAATGTTCATACGACACCAATTTTAATTGCACCATTACAAACACTTATGGCGCCTTC
CCAGATCGAACCATTTGCAAGGCAGCTCAAGCTGTTTTTCCAACCACAGAAGAAGAAGTC
ATTTCTATAGTAGCGAATGCAACAAGGGAAAAGCGAAAAATGAAAATCACAACTCGATTT
TCTAGTAGCATACCCAAATTGGTATGTCTAGACAATGGTGATCAAGACGGGTTACTTATA
AGTACAAAATTCCTAAATAAAATCATAAAAATCGATCAAGAAAACATGATGATCACCGTT
GAAAGTGGGGTGACATTGAGACAACTAATTAGTGAGGCAGGTAAAGCAGGTTTGGTCCTG
CCTTACACGCCTTACTGGTGGGGTTTAACGATTGGTGGCTTAATTGGGACCGGAGCTCAT
GGAAGTTCTCTCTGGGGTTTGGGAAGTTCGGTACATGATTATATTGTACAACTTCGAATT
GTTACACCAGCTGATGCGGCAAATAATTATGCTAAAGTCCGTATATTGGAAAATGGTAGC
CCCGACTTGAATGCTGTTAGAGTGTCACTAGGTGTTCTTGGAGTTGTTTCACAGGTGACA
CTAAAACTAGAACGAGTGTTCAAACGTTCAATTACCTTTTCTGAAAGGGATGACTCAAAC
TTAGGGGAAGATGCAGCTACTTTTGGGAGACAACATGAATTTGCTGATTTTACGTGGTAT
CCGAGTCAACACAAGGTTATTTATAGGATCGATGATCGAGTTAGTATCGACACTCCTGGC
AATGCCCTTAATGACTTCCTTGGATTTCGCCCTACAGATCAATACTTGCTCGCCTCTCTC
AGAACCCTGGAGGAGATACTAGAATCAACAAATAATGCTGATGGAAAATGCCTTGATGCA
ACAAAAACCACTGGCATATTGAAGTCTCTTTCTTATGGGTGGACAAATAATGGTACTGGC
TATCCAATGGTTGGGTTTCACGACCGAGTCCAAGCATCAGGAACATGCCTAGACAGTCAT
GAAGGTGCAACATGCCCTTGGGACCATAGAGTTAAAGGTCTATTTTTTCACCAAACAACA
TTTACCATTAGTTTATCAAAAGTCAAAGGTTTCATTGAAGATGTCCAAAGGCTAGTTGCT
TTAGAGCCTAAGGCACTATGTGTCCTTGACTTATACAATGGAATCCTCATGAGGTATGTT
ACAACTTCAAATGCTTACTTGGGTAAACAAGAAGATTCTTTGGATTTTGACATCACATAT
TATAGAAGCAAGGACCCAATGTCCCCTAGACTCTTTGAAGACTTCCTTGAAGAAATTGAA
CAACTAGCATTTTTCAAATATGGTGCATTGCCACATTGGGGTAAAAATAGGAATGTAGCA
TTTATTGGGGCAATCAACAAGTACAAAAATGTTGATAAATTCTTGCAAGTGAAACAAAGT
TATGACCATTTTGGTTTATTCTCAAGTGAGTGGACTGATCAAGTTTTAGGCTTAAAAGAT
GGGTTGAGCATAGTCAAAGAAGGTTGTGCTCTAGAAGGACTATGCATTTGCTCTAAAGAT
ATTCATTGTGCTCCAAACAAGGGTTACTTTTGTCGACCCGGAAGAATTTACAAAGATGCC
AGGGTGTGTACTAATTCATCGTTAAGCACTATCGATATCCAAACAAGGAAAACAATAAGC
ACATCAATGTAACACTTTGTTCTGATGCTTGTTACGTATTATTTCATAATGTATCGTATC
GTATTGTATTATGTTGTATTGTATCGTACTGTATTGTATTGTATCTTACTATATTGTTTT
AATGAATAAAGTGTTTGGATAGAT